RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PPP4R2Q9NY27 417 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 TBC1D29Q9UFV1 150 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 STAP1Q9ULZ2 295 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 PRKAB1Q9Y478 270 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 ST14Q9Y5Y6 855 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 DCHS2Q6V1P9 2916 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 KIR2DS5A0A0G2JLQ3 304 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 A0A0G2JNG1 304 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 A0A0U1RQS6 177 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 UBA6A0AVT1 1052 aaPredicted RBP6.22□□□□□ -1.41
SDCBP-203ENST00000424270 CFAP69A5D8W1 941 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 LILRA5A6NI73 299 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 OR5K4A6NMS3 321 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 KIR2DS3K7RE56 304 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 MEN1O00255 615 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 MAPK13O15264 365 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 SLC19A2O60779 497 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 CD160O95971 181 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 EPB41P11171 864 aaKnown RBP6.22□□□□□ -1.41
SDCBP-203ENST00000424270 ADAM8P78325 824 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 ARG2P78540 354 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 ADORA2A-AS1P86434 159 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 DMPKQ09013 629 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 KIR2DS5Q14953 304 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 GPR19Q15760 415 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 LONRF1Q17RB8 773 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 FOXD4L6Q3SYB3 417 aaPredicted RBP6.22□□□□□ -1.41
SDCBP-203ENST00000424270 ACBD5Q5T8D3 534 aaPredicted RBP6.22□□□□□ -1.41
SDCBP-203ENST00000424270 MLIPQ5VWP3 458 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 PLEKHA7Q6IQ23 1121 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 IYDQ6PHW0 289 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 FOXD4L3Q6VB84 417 aaPredicted RBP6.22□□□□□ -1.41
SDCBP-203ENST00000424270 LINC00696Q6ZRV3 163 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 PRSS42Q7Z5A4 293 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 TECPR1Q7Z6L1 1165 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 PELI3Q8N2H9 469 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 DNAAF3Q8N9W5 541 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 HCAR2Q8TDS4 363 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 SHC3Q92529 594 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 NR4A3Q92570 626 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 UBXN4Q92575 508 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 SDCCAG3Q96C92 435 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 RMND5BQ96G75 393 aaPredicted RBP6.22□□□□□ -1.41
SDCBP-203ENST00000424270 INTS4Q96HW7 963 aaKnown RBP6.22□□□□□ -1.41
SDCBP-203ENST00000424270 ZNF641Q96N77 438 aaPredicted RBP6.22□□□□□ -1.41
SDCBP-203ENST00000424270 NDC1Q9BTX1 674 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 KCND1Q9NSA2 647 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 PIGVQ9NUD9 493 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 STMN3Q9NZ72 180 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 COQ3Q9NZJ6 369 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 TINAGQ9UJW2 476 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 SMC3Q9UQE7 1217 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 MAPK8IP1Q9UQF2 711 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 SLC17A4Q9Y2C5 497 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 PLEKHA6Q9Y2H5 1048 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 PTRH2Q9Y3E5 179 aaKnown RBP6.22□□□□□ -1.41
SDCBP-203ENST00000424270 MFHAS1Q9Y4C4 1052 aa6.22□□□□□ -1.41
SDCBP-203ENST00000424270 PVALEFA0A1B0GWK0 134 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 PDZK1P1A8MUH7 402 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 WIPF1O43516 503 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 KDELR3O43731 214 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 DAB1O75553 588 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 LETM1O95202 739 aaPredicted RBP6.21□□□□□ -1.42
SDCBP-203ENST00000424270 CRYABP02511 175 aaKnown RBP6.21□□□□□ -1.42
SDCBP-203ENST00000424270 GLI1P08151 1106 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 F3P13726 295 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 CYP2A7P20853 494 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 ETV3P41162 512 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 GPD2P43304 727 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 CAPZBP47756 277 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 PRSS12P56730 875 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 SNX16P57768 344 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 YBX1P67809 324 aaKnown RBP6.21□□□□□ -1.42
SDCBP-203ENST00000424270 BCL2L1Q07817 233 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 RALGDSQ12967 914 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 STK4Q13043 487 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 AIMP2Q13155 320 aaKnown RBP6.21□□□□□ -1.42
SDCBP-203ENST00000424270 PDCLQ13371 301 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 CUL4BQ13620 913 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 LAMB3Q13751 1172 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 NCF4Q15080 339 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 PCOLCEQ15113 449 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 STK38Q15208 465 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 CDSNQ15517 529 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 SEPT7Q16181 437 aaKnown RBP6.21□□□□□ -1.42
SDCBP-203ENST00000424270 C3AR1Q16581 482 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 PTCHD3Q3KNS1 767 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 PYCR3Q53H96 274 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 FBXW10Q5XX13 1052 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 LCN10Q6JVE6 187 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 TMEM26Q6ZUK4 368 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 DPPA4Q7L190 304 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 SYTL1Q8IYJ3 562 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 CEP57L1Q8IYX8 460 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 UBR7Q8N806 425 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 GOT1L1Q8NHS2 421 aaPredicted RBP6.21□□□□□ -1.42
SDCBP-203ENST00000424270 CASKIN2Q8WXE0 1202 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 KLHL6Q8WZ60 621 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 RSC1A1Q92681 617 aa6.21□□□□□ -1.42
SDCBP-203ENST00000424270 CXorf40BQ96DE9 158 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms