RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TRIM72Q6ZMU5 477 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 C16orf47Q6ZP98 133 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 HIST3H2AQ7L7L0 130 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 MAMDC2Q7Z304 686 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 FJX1Q86VR8 437 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 REXO1L1PQ8IX06 675 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 OR4K1Q8NGD4 311 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 HIST1H2ACQ93077 130 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 MYLPFQ96A32 169 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CYFIP2Q96F07 1278 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 NR1H4Q96RI1 486 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ELF4Q99607 663 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 OLFM1Q99784 485 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 MIPEPQ99797 713 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 PTPN18Q99952 460 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 BARHL1Q9BZE3 327 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 NRSN2Q9GZP1 204 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 RMI1Q9H9A7 625 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CYP3A43Q9HB55 503 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 PREBQ9HCU5 417 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 BPIFA1Q9NP55 256 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 WASH6PQ9NQA3 447 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.53□□□□□ -1.842e-7■□□□□ 11.2
TOP2A-201ENST00000423485 ENTPD4Q9Y227 616 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 RAI2Q9Y5P3 530 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TRPM7Q96QT4 1865 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SPATA31C2B4DYI2 1134 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 LINC01565O15544 149 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ARSAP15289 507 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ITPKAP23677 461 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 U2AF2P26368 475 aaKnown RBP eCLIP3.53□□□□□ -1.844e-10■■□□□ 13.9
TOP2A-201ENST00000423485 PCSK6P29122 969 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TPP2P29144 1249 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ARHGAP25P42331 645 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ACADVLP49748 655 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SLC7A5Q01650 507 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 MEF2AQ02078 507 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 DSG1Q02413 1049 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TROAPQ12815 778 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TAF10Q12962 218 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TUBB3Q13509 450 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 RAB35Q15286 201 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SMU1Q2TAY7 513 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 RABL6Q3YEC7 729 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TOP6BLQ8N6T0 577 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CNEP1R1Q8N9A8 125 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SLC26A7Q8TE54 656 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 JADE3Q92613 823 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ART4Q93070 314 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 NUS1Q96E22 293 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 C3orf30Q96M34 536 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ELAC2Q9BQ52 826 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 HAUS8Q9BT25 410 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 DHX35Q9H5Z1 703 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 EIF3KQ9UBQ5 218 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CHORDC1Q9UHD1 332 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 EVLQ9UI08 416 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 MKL2Q9ULH7 1088 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 LSM1O15116 133 aaKnown RBP3.53□□□□□ -1.85
TOP2A-201ENST00000423485 SLC7A4O43246 635 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 RBP3P10745 1247 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 PRF1P14222 555 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF28P17035 718 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 SPINK2P20155 84 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 FDXRP22570 491 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 CYLC1P35663 651 aaPredicted RBP3.53□□□□□ -1.85
TOP2A-201ENST00000423485 PBX3P40426 434 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 RANBP1P43487 201 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 MRPS15P82914 257 aaKnown RBP3.53□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF33BQ06732 778 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 BST2Q10589 180 aaKnown RBP3.53□□□□□ -1.85
TOP2A-201ENST00000423485 TARDBPQ13148 414 aaKnown RBP eCLIP3.53□□□□□ -1.85
TOP2A-201ENST00000423485 CUL2Q13617 745 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 C1DQ13901 141 aaKnown RBP3.53□□□□□ -1.85
TOP2A-201ENST00000423485 CST6Q15828 149 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 MUM1Q2TAK8 710 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 PAGE2BQ5JRK9 111 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 RASIP1Q5U651 963 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 TYW1BQ6NUM6 668 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 CRTC3Q6UUV7 619 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 GAREM2Q75VX8 874 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF771Q7L3S4 317 aaPredicted RBP3.53□□□□□ -1.85
TOP2A-201ENST00000423485 TMCO2Q7Z6W1 182 aaPredicted RBP3.53□□□□□ -1.85
TOP2A-201ENST00000423485 FBXO15Q8NCQ5 510 aaPredicted RBP3.53□□□□□ -1.85
TOP2A-201ENST00000423485 HIPK4Q8NE63 616 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 AGAP3Q96P47 875 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 EPYCQ99645 322 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 SGPP1Q9BX95 441 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 SPZ1Q9BXG8 430 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 LY9Q9HBG7 655 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 TMPRSS11EQ9UL52 423 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 ATP8A1Q9Y2Q0 1164 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 ATRNL1Q5VV63 1379 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 NAV1Q8NEY1 1877 aa3.53□□□□□ -1.85
TOP2A-201ENST00000423485 A0A087X0T9 212 aa3.52□□□□□ -1.85
TOP2A-201ENST00000423485 A0A1W2PP18 115 aa3.52□□□□□ -1.85
TOP2A-201ENST00000423485 RCCD1A6NED2 376 aa3.52□□□□□ -1.85
TOP2A-201ENST00000423485 TOR1BO14657 336 aa3.52□□□□□ -1.85
TOP2A-201ENST00000423485 BIRC5O15392 142 aa3.52□□□□□ -1.85
TOP2A-201ENST00000423485 CYP1A2P05177 515 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms