RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 RCAN2Q14206 197 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 SNX17Q15036 470 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 C6orf141Q5SZD1 244 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 SCIMPQ6UWF3 145 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 ARHGAP12Q8IWW6 846 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 LEMD2Q8NC56 503 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 MUL1Q969V5 352 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 KLRG1Q96E93 195 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 MAGED4Q96JG8 741 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 AMBRA1Q9C0C7 1298 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 SCUBE2Q9NQ36 999 aa16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 MARCH4Q9P2E8 410 aaPredicted RBP16.58■□□□□ 0.24
NPC1L1-203ENST00000423141 WISP3O95389 354 aaPredicted RBP16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 BMP4P12644 408 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 TPTEP56180 551 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 KCNK10P57789 538 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 FPGSQ05932 587 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 SF3B4Q15427 424 aaKnown RBP eCLIP16.57■□□□□ 0.242e-7■□□□□ 10.2
NPC1L1-203ENST00000423141 OR4D1Q15615 310 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 CARTPTQ16568 116 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 FSCN1Q16658 493 aaKnown RBP16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 PLA2G4EQ3MJ16 856 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 DCAF4L1Q3SXM0 396 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 RBM48Q5RL73 367 aaKnown RBP16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 GLYATQ6IB77 296 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 TAF2Q6P1X5 1199 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 RANBP10Q6VN20 620 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 KIAA0408Q6ZU52 694 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 CILP2Q8IUL8 1156 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 MFSD4AQ8N468 514 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 FAM86B1Q8N7N1 296 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 OR13J1Q8NGT2 312 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 NUDT8Q8WV74 236 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 KCTD13Q8WZ19 329 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 TSPAN17Q96FV3 270 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 MBOAT4Q96T53 435 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 WDR12Q9GZL7 423 aaKnown RBP16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 PFDN6O15212 129 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 GSSP48637 474 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 ARSDP51689 593 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 SELPLGQ14242 412 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 INAQ16352 499 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 PAGE2BQ5JRK9 111 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 NOL9Q5SY16 702 aaKnown RBP16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 ALKAL1Q6UXT8 129 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 DTWD1Q8N5C7 304 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 PTCD2Q8WV60 388 aaKnown RBP16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 HDAC2Q92769 488 aaKnown RBP16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 SDCCAG3Q96C92 435 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 CCDC90BQ9GZT6 254 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 RNF39Q9H2S5 420 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 CARS2Q9HA77 564 aaKnown RBP16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 FAM118AQ9NWS6 357 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 SCHIP1Q9P0W5 487 aaPredicted RBP16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 CACNG4Q9UBN1 327 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 PMF1-BGLAPU3KQ54 211 aa16.57■□□□□ 0.24
NPC1L1-203ENST00000423141 SMIM28A0A1B0GU29 152 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 MSI1O43347 362 aaKnown RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 MAFKO60675 156 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 FGF4P08620 206 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 CD1DP15813 335 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 CXCR3P49682 368 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 TPD52P55327 224 aaPredicted RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 CD47Q08722 323 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 LAPTM5Q13571 262 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 MAPRE1Q15691 268 aaKnown RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 COQ5Q5HYK3 327 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 TMEM236Q5W0B7 351 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 OR6P1Q8NGX9 317 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 PABPC5Q96DU9 382 aaKnown RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 NSMCE2Q96MF7 247 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 MUC13Q9H3R2 512 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 SEMA4BQ9NPR2 832 aaPredicted RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 ENTPD7Q9NQZ7 604 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 RBM22Q9NW64 420 aaKnown RBP eCLIP16.56■□□□□ 0.241e-9■□□□□ 9.5
NPC1L1-203ENST00000423141 GDAP2Q9NXN4 497 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 UTS2RQ9UKP6 389 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 UBQLN1Q9UMX0 589 aaKnown RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 BRWD3Q6RI45 1802 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 MTHFD2P13995 350 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 IL12AP29459 219 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 PRDX3P30048 256 aaKnown RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 MTHFRP42898 656 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 TAF6P49848 677 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 GEMP55040 296 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 NFKB2Q00653 900 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 CRY1Q16526 586 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 ADPRMQ3LIE5 342 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 AASDHQ4L235 1098 aaPredicted RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 HABP4Q5JVS0 413 aaKnown RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 WSCD1Q658N2 575 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 SLC27A1Q6PCB7 646 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 SCML4Q8N228 414 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 TTC30BQ8N4P2 665 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 Q8N9G6 341 aaPredicted RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 NEU3Q9UQ49 428 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 MIA3Q5JRA6 1907 aa16.56■□□□□ 0.24
NPC1L1-203ENST00000423141 CCDC154A6NI56 674 aa16.55■□□□□ 0.24
NPC1L1-203ENST00000423141 LSM1O15116 133 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms