RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 OR4C6Q8NH72 309 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 PTCD2Q8WV60 388 aaKnown RBP15.61■□□□□ 0.09
BRAT1-202ENST00000421712 KRT12Q99456 494 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 ATXN10Q9UBB4 475 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 CRLS1Q9UJA2 301 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 NEU2Q9Y3R4 380 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 PRKAB1Q9Y478 270 aa15.61■□□□□ 0.09
BRAT1-202ENST00000421712 GOLGA8MH3BSY2 632 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 TPP1O14773 563 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 GPR39O43194 453 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 TNFSF14O43557 240 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 CDK14O94921 469 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 ZNF8P17098 575 aaPredicted RBP15.6■□□□□ 0.09
BRAT1-202ENST00000421712 ITGALP20701 1170 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 AKT1P31749 480 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 MC4RP32245 332 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 PTGIRP43119 386 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 NPY2RP49146 381 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 ILF3Q12906 894 aaKnown RBP eCLIP15.6■□□□□ 0.09
BRAT1-202ENST00000421712 PTK6Q13882 451 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 KCNJ11Q14654 390 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 ZRANB3Q5FWF4 1079 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 ANKRD22Q5VYY1 191 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 SYDE1Q6ZW31 735 aaPredicted RBP15.6■□□□□ 0.09
BRAT1-202ENST00000421712 SDR16C5Q8N3Y7 309 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 FAM46DQ8NEK8 389 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 CCL4L1Q8NHW4 92 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 CPT1BQ92523 772 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 GLMNQ92990 594 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 VPS35Q96QK1 796 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 OR2M4Q96R27 311 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 GSDMCQ9BYG8 508 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 FAM96AQ9H5X1 160 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 RMI1Q9H9A7 625 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 EVA1BQ9NVM1 165 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 NLE1Q9NVX2 485 aaPredicted RBP15.6■□□□□ 0.09
BRAT1-202ENST00000421712 SIRPGQ9P1W8 387 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 VPS18Q9P253 973 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 GULP1Q9UBP9 304 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 GPR34Q9UPC5 381 aa15.6■□□□□ 0.09
BRAT1-202ENST00000421712 SCN8AQ9UQD0 1980 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 MROH6A6NGR9 719 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 KIF2AO00139 706 aaPredicted RBP15.59■□□□□ 0.09
BRAT1-202ENST00000421712 GRID2O43424 1007 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 VEGFDO43915 354 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 TUBB4AP04350 444 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 MSH3P20585 1137 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 MGAT1P26572 445 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 CRADDP78560 199 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 C2orf54Q08AI8 447 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 TMEM115Q12893 351 aaPredicted RBP15.59■□□□□ 0.09
BRAT1-202ENST00000421712 NFATC2Q13469 925 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 PYCR3Q53H96 274 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 PCID2Q5JVF3 399 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 LDLRAP1Q5SW96 308 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 TSTD2Q5T7W7 516 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 ZCCHC8Q6NZY4 707 aaKnown RBP15.59■□□□□ 0.09
BRAT1-202ENST00000421712 CASC4Q6P4E1 433 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 SLC30A9Q6PML9 568 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 LVRNQ6Q4G3 990 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 CRTC3Q6UUV7 619 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 CHST15Q7LFX5 561 aaPredicted RBP15.59■□□□□ 0.09
BRAT1-202ENST00000421712 NLRP9Q7RTR0 991 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 TAS2R42Q7RTR8 314 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 PCGF5Q86SE9 256 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 ADGRG6Q86SQ4 1221 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 PPIL6Q8IXY8 311 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 SPATA4Q8NEY3 305 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 DTX3LQ8TDB6 740 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 SLCO2A1Q92959 643 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 DCUN1D1Q96GG9 259 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 SCARF2Q96GP6 870 aaPredicted RBP15.59■□□□□ 0.09
BRAT1-202ENST00000421712 CDKN2AIPNLQ96HQ2 116 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 APOLD1Q96LR9 279 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 RANBP9Q96S59 729 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 ZCCHC2Q9C0B9 1178 aaKnown RBP15.59■□□□□ 0.09
BRAT1-202ENST00000421712 IL22Q9GZX6 179 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 DPEP2Q9H4A9 486 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 TRNAU1APQ9NX07 287 aaKnown RBP15.59■□□□□ 0.09
BRAT1-202ENST00000421712 TMPRSS11EQ9UL52 423 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 APOBEC2Q9Y235 224 aaKnown RBP15.59■□□□□ 0.09
BRAT1-202ENST00000421712 TCAF1Q9Y4C2 921 aa15.59■□□□□ 0.09
BRAT1-202ENST00000421712 ARID1BQ8NFD5 2236 aaPredicted RBP15.59■□□□□ 0.09
BRAT1-202ENST00000421712 CNOT1A5YKK6 2376 aaKnown RBP15.58■□□□□ 0.09
BRAT1-202ENST00000421712 GAPDHSO14556 408 aaPredicted RBP15.58■□□□□ 0.08
BRAT1-202ENST00000421712 TTI1O43156 1089 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 NUAK1O60285 661 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 DNAJC6O75061 913 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 MYF5P13349 255 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 CKMT2P17540 419 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 AK4P27144 223 aaPredicted RBP15.58■□□□□ 0.08
BRAT1-202ENST00000421712 MAGEA6P43360 314 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 PRAMEP78395 509 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 XIAPP98170 497 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 CTBSQ01459 385 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 CKAP4Q07065 602 aaKnown RBP15.58■□□□□ 0.08
BRAT1-202ENST00000421712 DNAJC3Q13217 504 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 PEX6Q13608 980 aa15.58■□□□□ 0.08
BRAT1-202ENST00000421712 DHX34Q14147 1143 aaKnown RBP15.58■□□□□ 0.08
BRAT1-202ENST00000421712 NR0B2Q15466 257 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms