RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 ACP5P13686 325 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 DESP17661 470 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 GNLYP22749 145 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 MAPK9P45984 424 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 CDH6P55285 790 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 NIPAL4Q0D2K0 466 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 KIR2DS5Q14953 304 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 HENMT1Q5T8I9 393 aaKnown RBP14.06□□□□□ -0.16
NFE4-201ENST00000420058 E4F1Q66K89 784 aaPredicted RBP14.06□□□□□ -0.16
NFE4-201ENST00000420058 TMCO3Q6UWJ1 677 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 ARRDC2Q8TBH0 407 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 EID2BQ96D98 161 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 PCMTD1Q96MG8 357 aaPredicted RBP14.06□□□□□ -0.16
NFE4-201ENST00000420058 LYSMD1Q96S90 227 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 HERPUD2Q9BSE4 406 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 ULBP3Q9BZM4 244 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 EPB41L1Q9H4G0 881 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 AKIRIN1Q9H9L7 192 aaPredicted RBP14.06□□□□□ -0.16
NFE4-201ENST00000420058 UCK1Q9HA47 277 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 PCDH18Q9HCL0 1135 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 DTLQ9NZJ0 730 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 ZNF624Q9P2J8 865 aaPredicted RBP14.06□□□□□ -0.16
NFE4-201ENST00000420058 CNOT8Q9UFF9 292 aaKnown RBP14.06□□□□□ -0.16
NFE4-201ENST00000420058 SLC23A2Q9UGH3 650 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 CHKBQ9Y259 395 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 PCDHGA6Q9Y5G7 932 aa14.06□□□□□ -0.16
NFE4-201ENST00000420058 MKRN2OSH3BPM6 223 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 DDX3XO00571 662 aaKnown RBP eCLIP14.05□□□□□ -0.168e-7■□□□□ 10.4
NFE4-201ENST00000420058 KIF1CO43896 1103 aaKnown RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 NUAK1O60285 661 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 DNAJB5O75953 348 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 RECKO95980 971 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 TYRP1P17643 537 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 XRCC1P18887 633 aaPredicted RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 SLC19A1P41440 591 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 LEPRP48357 1165 aaKnown RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 SPINT3P49223 89 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 PPM1FP49593 454 aaPredicted RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 CLCNKAP51800 687 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 PMS2P54278 862 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 DSC2Q02487 901 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 FOXM1Q08050 763 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 BOLA3Q53S33 107 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 ZNF648Q5T619 568 aaPredicted RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 TMEM26Q6ZUK4 368 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 ZNF571Q7Z3V5 609 aaPredicted RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 ATCAYQ86WG3 371 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 PLXDC1Q8IUK5 500 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 APLFQ8IW19 511 aaPredicted RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 RAVER1Q8IY67 606 aaKnown RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 ATPAF2Q8N5M1 289 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 MAML1Q92585 1016 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 TDRD1Q9BXT4 1180 aaKnown RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 TRIM55Q9BYV6 548 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.05□□□□□ -0.16
NFE4-201ENST00000420058 ZMYND15Q9H091 742 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 ATXN10Q9UBB4 475 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 POLHQ9Y253 713 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 PCDHB3Q9Y5E6 796 aa14.05□□□□□ -0.16
NFE4-201ENST00000420058 OR5K4A6NMS3 321 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 GRID2O43424 1007 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 SEMA7AO75326 666 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 KATNA1O75449 491 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 SPAG6O75602 509 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 CREG1O75629 220 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 KIAA0754O94854 1291 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 TIAF1O95411 115 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 FGF5P12034 268 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 GZMAP12544 262 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 ZNF8P17098 575 aaPredicted RBP14.04□□□□□ -0.16
NFE4-201ENST00000420058 ARL4AP40617 200 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 SEPHS1P49903 392 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 IL11RAQ14626 422 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 BBS5Q8N3I7 341 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 AOPEPQ8N6M6 819 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 GALNT11Q8NCW6 608 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 KLHL6Q8WZ60 621 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 HSPH1Q92598 858 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 ELMO2Q96JJ3 720 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 OR6C1Q96RD1 312 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 RUFY1Q96T51 708 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 CARD9Q9H257 536 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 FAM83DQ9H4H8 585 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 ZNF768Q9H5H4 540 aaKnown RBP14.04□□□□□ -0.16
NFE4-201ENST00000420058 RMI1Q9H9A7 625 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 ARFGAP3Q9NP61 516 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 MLXIPLQ9NP71 852 aa14.04□□□□□ -0.16
NFE4-201ENST00000420058 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.04□□□□□ -0.16
NFE4-201ENST00000420058 TNRC6AQ8NDV7 1962 aaKnown RBP14.03□□□□□ -0.16
NFE4-201ENST00000420058 SEC16AO15027 2179 aa14.03□□□□□ -0.16
NFE4-201ENST00000420058 CDC14CA4D256 554 aa14.03□□□□□ -0.16
NFE4-201ENST00000420058 TOX3O15405 576 aaPredicted RBP14.03□□□□□ -0.16
NFE4-201ENST00000420058 RFPL1O75677 317 aa14.03□□□□□ -0.16
NFE4-201ENST00000420058 UBXN7O94888 489 aa14.03□□□□□ -0.16
NFE4-201ENST00000420058 NDUFA10O95299 355 aa14.03□□□□□ -0.16
NFE4-201ENST00000420058 TPM2P07951 284 aa14.03□□□□□ -0.16
NFE4-201ENST00000420058 CD48P09326 243 aa14.03□□□□□ -0.16
NFE4-201ENST00000420058 BRAFP15056 766 aa14.03□□□□□ -0.16
NFE4-201ENST00000420058 ARSEP51690 589 aa14.03□□□□□ -0.16
NFE4-201ENST00000420058 MMRN1Q13201 1228 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms