RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TPK1Q9H3S4 243 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC38A7Q9NVC3 462 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 EURLQ9NYK6 297 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 PTTG2Q9NZH5 202 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 AIPL1Q9NZN9 384 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 ZNHIT2Q9UHR6 403 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 ATPIF1Q9UII2 106 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 SCOCQ9UIL1 159 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 ARHGAP26Q9UNA1 814 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 L3MBTL1Q9Y468 752 aa5.55□□□□□ -1.52
ECHDC1-206ENST00000417628 SMIM31A0A1B0GVY4 71 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 DYTNA2CJ06 578 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 OR14I1A6ND48 311 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 C2orf81A6NN90 581 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ZNF839A8K0R7 811 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 TCP11X1B4DZS4 312 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 GOLGA8MH3BSY2 632 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC9A3R1O14745 358 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 TULP3O75386 442 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 SERPINB7O75635 380 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 CNTN5O94779 1100 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 OAZ2O95190 189 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 KRT14P02533 472 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 GLI1P08151 1106 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 GSTT2P0CG29 244 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 GSTT2BP0CG30 244 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 NR1D1P20393 614 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 HMOX2P30519 316 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 HSPA9P38646 679 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 SKIV2L2P42285 1042 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 RXRGP48443 463 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 MXI1P50539 228 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 THOP1P52888 689 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ADKP55263 362 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ATP2C1P98194 919 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ROM1Q03395 351 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 LRP8Q14114 963 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 NFE2L1Q14494 772 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 MXD4Q14582 209 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ITIH4Q14624 930 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 KPNB1Q14974 876 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 PPP1R7Q15435 360 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 TAF11Q15544 211 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 INSCQ1MX18 579 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ANKDD1AQ495B1 522 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ANO6Q4KMQ2 910 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 SLFN12LQ6IEE8 588 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 TTC23LQ6PF05 361 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ETV3LQ6ZN32 361 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ANO5Q75V66 913 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 RUFY3Q7L099 469 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ADGRG2Q8IZP9 1017 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 OR4C6Q8NH72 309 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 TSPEARQ8WU66 669 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 SGCDQ92629 289 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ALG3Q92685 438 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 RAX2Q96IS3 184 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ANKRD36BP1Q96IX9 119 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 CYP2S1Q96SQ9 504 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 DHX33Q9H6R0 707 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 RPF1Q9H9Y2 349 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 HAUS2Q9NVX0 235 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 PPP1R14DQ9NXH3 145 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 MOCS1Q9NZB8 636 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 ARHGAP28Q9P2N2 729 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 DEC1Q9P2X7 70 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 GDAQ9Y2T3 454 aa5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-206ENST00000417628 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 A0A1B0GVL5 298 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 GTPBP10A4D1E9 387 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CTAGE15A4D2H0 777 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 VWA3AA6NCI4 1184 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 TMEM114B3SHH9 223 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 LEFTY2O00292 366 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 IFIT3O14879 490 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 NVLO15381 856 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 SULT1B1O43704 296 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 PFKFB2O60825 505 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 KCNJ13O60928 360 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 B3GALNT1O75752 331 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 TCEA3O75764 348 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 LCA5LO95447 670 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 SEMA4FO95754 770 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ZBED1O96006 694 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 KRT6AP02538 564 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 KRT6BP04259 564 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CYP1A2P05177 515 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CELA3BP08861 270 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ENO2P09104 434 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CTAGE8P0CG41 777 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 PIM1P11309 404 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 HMGA1P17096 107 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CAPN3P20807 821 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 TGM2P21980 687 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 IL32P24001 234 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 NFKBIAP25963 317 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ITGA3P26006 1051 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ACSL1P33121 698 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 SERPINB6P35237 376 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms