RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 NENFQ9UMX5 172 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 KIR2DS5A0A0G2JLQ3 304 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 A0A0G2JNG1 304 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 SYCE3A1L190 88 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 A6NCN8 305 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 GOLGA6L19H0YKK7 550 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 KIR2DS3K7RE56 304 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 GRID2O43424 1007 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 MMP2P08253 660 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 F3P13726 295 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 MAPK9P45984 424 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 EPHA4P54764 986 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 KIR2DS5Q14953 304 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 ARHGAP22Q7Z5H3 698 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 PHYKPLQ8IUZ5 450 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 AVL9Q8NBF6 648 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 RTP4Q96DX8 246 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 RNF157Q96PX1 679 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 SLC25A18Q9H1K4 315 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 CARD9Q9H257 536 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 ADNPQ9H2P0 1102 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 IL17BQ9UHF5 180 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 SPTA1P02549 2419 aa14.28□□□□□ -0.12
PAF1-202ENST00000416728 LRRD1A4D1F6 860 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 OR5K4A6NMS3 321 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 ZNF891A8MT65 544 aaPredicted RBP14.27□□□□□ -0.12
PAF1-202ENST00000416728 TERTO14746 1132 aaKnown RBP14.27□□□□□ -0.12
PAF1-202ENST00000416728 CAPN5O15484 640 aaPredicted RBP14.27□□□□□ -0.12
PAF1-202ENST00000416728 SUV39H1O43463 412 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 NUAK1O60285 661 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 KDELR1P24390 212 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 CASP14P31944 242 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 IFI35P80217 286 aaPredicted RBP14.27□□□□□ -0.12
PAF1-202ENST00000416728 MC2RQ01718 297 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 PPIDQ08752 370 aaKnown RBP14.27□□□□□ -0.12
PAF1-202ENST00000416728 ZBTB17Q13105 803 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 GALNT3Q14435 633 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 ZNF569Q5MCW4 686 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 CEACAM20Q6UY09 585 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 NLGN4XQ8N0W4 816 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 CNTD1Q8N815 330 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 NLGN4YQ8NFZ3 816 aaPredicted RBP14.27□□□□□ -0.12
PAF1-202ENST00000416728 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.27□□□□□ -0.12
PAF1-202ENST00000416728 RAPGEF5Q92565 580 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 KIAA1143Q96AT1 154 aaPredicted RBP14.27□□□□□ -0.12
PAF1-202ENST00000416728 CTRCQ99895 268 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 ZPBPQ9BS86 351 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 SPATA16Q9BXB7 569 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 PACSIN1Q9BY11 444 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 EPB41L1Q9H4G0 881 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 GPN2Q9H9Y4 310 aaPredicted RBP14.27□□□□□ -0.12
PAF1-202ENST00000416728 ZFYVE1Q9HBF4 777 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 ATXN10Q9UBB4 475 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 CPNE7Q9UBL6 633 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 KLHL3Q9UH77 587 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 PILRAQ9UKJ1 303 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 HEY1Q9Y5J3 304 aa14.27□□□□□ -0.12
PAF1-202ENST00000416728 SDK2Q58EX2 2172 aa14.27□□□□□ -0.13
PAF1-202ENST00000416728 SLC25A14O95258 325 aaPredicted RBP14.26□□□□□ -0.13
PAF1-202ENST00000416728 POLE2P56282 527 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 SLC18A3Q16572 532 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 ALS2CLQ60I27 953 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 PLD5Q8N7P1 536 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 SLC45A3Q96JT2 553 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 CATSPER2Q96P56 530 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 ZSCAN5AQ9BUG6 496 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 TBC1D10AQ9BXI6 508 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 OR2AG1Q9H205 316 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 OSGEPL1Q9H4B0 414 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 DEF6Q9H4E7 631 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 ARFGAP3Q9NP61 516 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 FBXO8Q9NRD0 319 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 IFNKQ9P0W0 207 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■■■□ 24.6
PAF1-202ENST00000416728 TENM4Q6N022 2769 aa14.26□□□□□ -0.13
PAF1-202ENST00000416728 LILRA5A6NI73 299 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 ZNF487B1APH4 448 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 GPR89AB7ZAQ6 455 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 MTA2O94776 668 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 SLC4A1P02730 911 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 PIRTP0C851 137 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 GPR89BP0CG08 455 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 ZNF8P17098 575 aaPredicted RBP14.25□□□□□ -0.13
PAF1-202ENST00000416728 MAP4P27816 1152 aaKnown RBP14.25□□□□□ -0.13
PAF1-202ENST00000416728 HNRNPH3P31942 346 aaKnown RBP14.25□□□□□ -0.13
PAF1-202ENST00000416728 NOP2P46087 812 aaKnown RBP14.25□□□□□ -0.13
PAF1-202ENST00000416728 CCR10P46092 362 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 CLCNKAP51800 687 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 DCDC1P59894 354 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 AP1B1Q10567 949 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 MESDQ14696 234 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 KDELC2Q7Z4H8 507 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 PLXDC1Q8IUK5 500 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 GPR26Q8NDV2 337 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 EID2BQ96D98 161 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 AGAP3Q96P47 875 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 TRIB3Q96RU7 358 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 EFHD1Q9BUP0 239 aa14.25□□□□□ -0.13
PAF1-202ENST00000416728 MAK16Q9BXY0 300 aaKnown RBP14.25□□□□□ -0.13
PAF1-202ENST00000416728 CEP41Q9BYV8 373 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms