RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 NEK2P51955 445 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 DNAJB13P59910 316 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 STX1BP61266 288 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 TUSC3Q13454 348 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 ZNF460Q14592 562 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 SF3B4Q15427 424 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHEK2-210ENST00000416671 PGS1Q32NB8 556 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 OTOP3Q7RTS5 596 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 RETREG3Q86VR2 466 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 SPATA6LQ8N4H0 392 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 PXYLP1Q8TE99 480 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 GPR78Q96P69 363 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 ING2Q9H160 280 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 EML4Q9HC35 981 aaKnown RBP13.77□□□□□ -0.21
CHEK2-210ENST00000416671 HMX1Q9NP08 348 aaPredicted RBP13.77□□□□□ -0.21
CHEK2-210ENST00000416671 AKIP1Q9NQ31 210 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 INTS10Q9NVR2 710 aaKnown RBP13.77□□□□□ -0.21
CHEK2-210ENST00000416671 ATP11BQ9Y2G3 1177 aa13.77□□□□□ -0.21
CHEK2-210ENST00000416671 BBIP1A8MTZ0 92 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 MOCS2O96007 188 aaPredicted RBP13.76□□□□□ -0.21
CHEK2-210ENST00000416671 ATP5F1P24539 256 aaPredicted RBP13.76□□□□□ -0.21
CHEK2-210ENST00000416671 RFC2P35250 354 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 TPTEP56180 551 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 RAB10P61026 200 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 SELENBP1Q13228 472 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 DNASE1L3Q13609 305 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 DSC3Q14574 896 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 CYP51A1Q16850 503 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 PM20D1Q6GTS8 502 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 CRTC3Q6UUV7 619 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 PIWIL3Q7Z3Z3 882 aaKnown RBP13.76□□□□□ -0.21
CHEK2-210ENST00000416671 SCN4BQ8IWT1 228 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 MUS81Q96NY9 551 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 PKMYT1Q99640 499 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 NDFIP2Q9NV92 336 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 GMIPQ9P107 970 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 ARPC2O15144 300 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 BCAS1O75363 584 aaPredicted RBP13.76□□□□□ -0.21
CHEK2-210ENST00000416671 RSL1D1O76021 490 aaKnown RBP13.76□□□□□ -0.21
CHEK2-210ENST00000416671 UGT2B4P06133 528 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 GSTM2P28161 218 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 NMBRP28336 390 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 NPY2RP49146 381 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 AIF1P55008 147 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 AQP6Q13520 282 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 MFSD4BQ5TF39 518 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 PDZD4Q76G19 769 aaPredicted RBP13.76□□□□□ -0.21
CHEK2-210ENST00000416671 FUNDC1Q8IVP5 155 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 SPATA22Q8NHS9 363 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 ZNF419Q96HQ0 510 aaPredicted RBP13.76□□□□□ -0.21
CHEK2-210ENST00000416671 DHRS1Q96LJ7 313 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 MRPL57Q9BQC6 102 aaKnown RBP13.76□□□□□ -0.21
CHEK2-210ENST00000416671 FUNDC2Q9BWH2 189 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 DNMT3BQ9UBC3 853 aaKnown RBP13.76□□□□□ -0.21
CHEK2-210ENST00000416671 MTRRQ9UBK8 725 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 VWA7Q9Y334 891 aa13.76□□□□□ -0.21
CHEK2-210ENST00000416671 A0A1W2PQ45 241 aaPredicted RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 A0A1W2PQY0 241 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 NEMP2A6NFY4 417 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 INPP4BO15327 924 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 F9P00740 461 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 AHSGP02765 367 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 STMN1P16949 149 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 TCEA1P23193 301 aaKnown RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 YWHAQP27348 245 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 ARCN1P48444 511 aaKnown RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 GPR15P49685 360 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 IFITM3Q01628 133 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 MAPRE1Q15691 268 aaKnown RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 INAVAQ3KP66 663 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 TFAP2DQ7Z6R9 452 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 RTN4RL1Q86UN2 441 aaPredicted RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 CUZD1Q86UP6 607 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 SNX29P2Q8IUI4 249 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 LEMD2Q8NC56 503 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 HDAC11Q96DB2 347 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 ADNPQ9H2P0 1102 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 PARVBQ9HBI1 364 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 TNFRSF12AQ9NP84 129 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 ABI2Q9NYB9 513 aaPredicted RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 MAP10Q9P2G4 905 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 IFT52Q9Y366 437 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 M0QZQ0 153 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 NR5A2O00482 541 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 MT-CYBP00156 380 aaPredicted RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 CYP11A1P05108 521 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 NR4A1P22736 598 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 ATP4BP51164 291 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 YWHAHQ04917 246 aaPredicted RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 CBX2Q14781 532 aaPredicted RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 TRIM71Q2Q1W2 868 aaKnown RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 TIGD2Q4W5G0 525 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 SLC39A12Q504Y0 691 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 PLEKHG7Q6ZR37 379 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 KDELC2Q7Z4H8 507 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 DSG4Q86SJ6 1040 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 LINC00523Q86TU6 105 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 SPATA2LQ8IUW3 424 aaPredicted RBP13.75□□□□□ -0.21
CHEK2-210ENST00000416671 CEP97Q8IW35 865 aa13.75□□□□□ -0.21
CHEK2-210ENST00000416671 MINDY1Q8N5J2 469 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms