RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 OR10G6Q8NH81 332 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 TFB1MQ8WVM0 346 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 TTC9Q92623 222 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 SH3KBP1Q96B97 665 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 AHCYL2Q96HN2 611 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 TEKT5Q96M29 485 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 HERPUD2Q9BSE4 406 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 ZSCAN5AQ9BUG6 496 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 TRIM5Q9C035 493 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 TRIM39Q9HCM9 518 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 SARS2Q9NP81 518 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 NFKBIL1Q9UBC1 381 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 KCNK6Q9Y257 313 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 ZNF711Q9Y462 761 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 PCDHB11Q9Y5F2 797 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 PCYT1BQ9Y5K3 369 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 OR5K4A6NMS3 321 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 GPR89AB7ZAQ6 455 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 C9orf172C9J069 976 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 EFSO43281 561 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 MTSS1O43312 755 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 CST8O60676 142 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 SLC25A14O95258 325 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 MT-CYBP00156 380 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 PIRTP0C851 137 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 GPR89BP0CG08 455 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 CCL4P13236 92 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 ACP5P13686 325 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 CLCNKAP51800 687 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 HHEXQ03014 270 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 TGIF1Q15583 401 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 KAZNQ674X7 775 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 SPOCD1Q6ZMY3 1216 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 B4GALNT4Q76KP1 1039 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 SLC9B2Q86UD5 537 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 ZFAND4Q86XD8 727 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 TC2NQ8N9U0 490 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 AGBL5Q8NDL9 886 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 RCBTB1Q8NDN9 531 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 SPATA22Q8NHS9 363 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 TAAR9Q96RI9 348 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 FOXJ2Q9P0K8 574 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 ATXN10Q9UBB4 475 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 TBC1D29Q9UFV1 150 aa17.4■□□□□ 0.38
PDLIM2-208ENST00000416159 KIR2DS5A0A0G2JLQ3 304 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 A0A0G2JNG1 304 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 KIR2DS3K7RE56 304 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 DUX1O43812 170 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 PMPCBO75439 489 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 ZRANB2O95218 330 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 LCA5LO95447 670 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 EML2O95834 649 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 THRAP10827 490 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 ZNF8P17098 575 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 CSTF2P33240 577 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 PPM1FP49593 454 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 KIR2DS5Q14953 304 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 TFDP3Q5H9I0 405 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 MANEAQ5SRI9 462 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 KIAA1614Q5VZ46 1190 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 ALS2CLQ60I27 953 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 DTX1Q86Y01 620 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 CCDC170Q8IYT3 715 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 KATNAL2Q8IYT4 538 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 RCOR2Q8IZ40 523 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 ZNF843Q8N446 348 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 AVL9Q8NBF6 648 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 CCDC112Q8NEF3 446 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 P3H4Q92791 437 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 GLYATL1Q969I3 302 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 ZMYND15Q9H091 742 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 OR2AG1Q9H205 316 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 LUC7LQ9NQ29 371 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 PDP2Q9P2J9 529 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 SAE1Q9UBE0 346 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 FAM153AQ9UHL3 310 aa17.39■□□□□ 0.37
PDLIM2-208ENST00000416159 SNX2O60749 519 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 FGF3P11487 239 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 F3P13726 295 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 PECAM1P16284 738 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 CSF2RBP32927 897 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 SPA17Q15506 151 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 ADGRG6Q86SQ4 1221 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 ZNF761Q86XN6 746 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 PHYKPLQ8IUZ5 450 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 VAT1Q99536 393 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 ARFGAP3Q9NP61 516 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 PCDHGA3Q9Y5H0 932 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 PCDHA13Q9Y5I0 950 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 ADGRG1Q9Y653 693 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 COL6A6A6NMZ7 2263 aa17.38■□□□□ 0.37
PDLIM2-208ENST00000416159 MGAQ8IWI9 3026 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 hCG_1818297A0A087WSY0 165 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 LOC285095A0A1B0GVY8 99 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 A6NCN8 305 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 HACD1B0YJ81 288 aa17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-208ENST00000416159 CHUKO15111 745 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms