RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CLEC4AQ9UMR7 237 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 PIP5K1BO14986 540 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 DLX3O60479 287 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 SLC22A3O75751 556 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 TKTP29401 623 aaKnown RBP12.84□□□□□ -0.35
SCN1B-202ENST00000415950 GSTM5P46439 218 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 TPTEP56180 551 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 QPRTQ15274 297 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 PPP1R3AQ16821 1122 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 RNASE12Q5GAN4 147 aaKnown RBP12.84□□□□□ -0.35
SCN1B-202ENST00000415950 MBLAC2Q68D91 279 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 SMYD1Q8NB12 490 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 OR2T12Q8NG77 320 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 TWIST2Q8WVJ9 160 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 RPL10LQ96L21 214 aaKnown RBP12.84□□□□□ -0.35
SCN1B-202ENST00000415950 SMPD3Q9NY59 655 aaPredicted RBP12.84□□□□□ -0.35
SCN1B-202ENST00000415950 CYTH4Q9UIA0 394 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 STON1Q9Y6Q2 735 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 PMF1-BGLAPU3KQ54 211 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 IQCF5A8MTL0 148 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 RFXANKO14593 260 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 SEMA3DO95025 777 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 CATP04040 527 aaKnown RBP12.83□□□□□ -0.35
SCN1B-202ENST00000415950 FGF3P11487 239 aaPredicted RBP12.83□□□□□ -0.35
SCN1B-202ENST00000415950 DGKAP23743 735 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 MTHFRP42898 656 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 CYP4F8P98187 520 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 ECT2LQ008S8 904 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 ZYG11AQ6WRX3 759 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 RNF44Q7L0R7 432 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 TAS1R3Q7RTX0 852 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 CNTD1Q8N815 330 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 KBTBD8Q8NFY9 601 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 TMIGD2Q96BF3 282 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 SLC2A6Q9UGQ3 507 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 CIDEBQ9UHD4 219 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 ENOPH1Q9UHY7 261 aa12.83□□□□□ -0.35
SCN1B-202ENST00000415950 FAM159BA6NKW6 160 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 RPL10P27635 214 aaKnown RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 ZNF252P-AS1Q0IIN9 211 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 TRAP1Q12931 704 aaKnown RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 MZT2BQ6NZ67 158 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 CCDC80Q76M96 950 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 PQLC3Q8N755 202 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 MYLPFQ96A32 169 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 ZNF778Q96MU6 729 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 MLPHQ9BV36 600 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 POLR3HQ9Y535 204 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 SMIM28A0A1B0GU29 152 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 MYBPHLA2RUH7 354 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 LOC110117498-PIK3R3F6TDL0 507 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 ERAL1O75616 437 aaKnown RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 RNASEH2AO75792 299 aaKnown RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 RSL1D1O76021 490 aaKnown RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 HPCAL1P37235 193 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 EPHB3P54753 998 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 TOP3AQ13472 1001 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 ZNF549Q6P9A3 640 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 SLC26A9Q7LBE3 791 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 CDCA5Q96FF9 252 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 GPR20Q99678 358 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 POLR1DQ9Y2S0 133 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 HEMK1Q9Y5R4 338 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 TBKBP1A7MCY6 615 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 CCNKO75909 580 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 AHSGP02765 367 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 SLC26A3P40879 764 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 CDK9P50750 372 aaKnown RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 PURAQ00577 322 aaKnown RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 DSC2Q02487 901 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 HFE2Q6ZVN8 426 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 STRADAQ7RTN6 431 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 CPSF7Q8N684 471 aaKnown RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 ADAM2Q99965 735 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 CLN6Q9NWW5 311 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 CRNNQ9UBG3 495 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-202ENST00000415950 SLC27A5Q9Y2P5 690 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 PCDHB9Q9Y5E1 797 aa12.83□□□□□ -0.36
SCN1B-202ENST00000415950 G3V2T6 193 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 H0Y858 1186 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 PAGE1O75459 146 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 TSPAN9O75954 239 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 HOXB8P17481 243 aaPredicted RBP12.82□□□□□ -0.36
SCN1B-202ENST00000415950 RCVRNP35243 200 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 PTPN5P54829 565 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 BNIP2Q12982 314 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 PROSER1Q86XN7 944 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 SLC34A3Q8N130 599 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 POMGNT2Q8NAT1 580 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 C1GALT1C1Q96EU7 318 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 LINGO1Q96FE5 620 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 TMEM74Q96NL1 305 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 CCDC28BQ9BUN5 200 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 DUSP16Q9BY84 665 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 RAB23Q9ULC3 237 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 PLIN4Q96Q06 1357 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 KPNA5O15131 536 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 MLYCDO95822 493 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 PRKCGP05129 697 aa12.82□□□□□ -0.36
SCN1B-202ENST00000415950 SPIBQ01892 262 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms