RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TJP2Q9UDY2 1190 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 hCG_1818297A0A087WSY0 165 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 KRT87PA6NCN2 255 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 APOL1O14791 398 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 ANGPT2O15123 496 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 HMGCRP04035 888 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 ODC1P11926 461 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 ALOX12P18054 663 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 MMP8P22894 467 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 PRKCHP24723 683 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 GRK4P32298 578 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 RABGGTBP53611 331 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 POU6F2P78424 691 aaPredicted RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 GAD2Q05329 585 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 SCRN3Q0VDG4 424 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 DPYSL3Q14195 570 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 PLCL1Q15111 1095 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 C9orf57Q5W0N0 161 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 HEATR6Q6AI08 1181 aaKnown RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 GTF2IRD2BQ6EKJ0 949 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 OVOS1Q6IE37 1185 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 KDELC2Q7Z4H8 507 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 GLRX5Q86SX6 157 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 GTF2IRD2Q86UP8 949 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 DDIASQ8IXT1 998 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 FBXL6Q8N531 539 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 LHFPL5Q8TAF8 219 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 GIMAP5Q96F15 307 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 REXO5Q96IC2 774 aaKnown RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 CCDC90BQ9GZT6 254 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 PCDHAC1Q9H158 963 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 DNMT3LQ9UJW3 386 aa7.8□□□□□ -1.16
SIK3-203ENST00000415541 FNDC3AQ9Y2H6 1198 aaKnown RBP7.8□□□□□ -1.16
SIK3-203ENST00000415541 CHADO15335 359 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 HCRTO43612 131 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 TMEM63AO94886 807 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 SLC10A3P09131 477 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 EIF2DP41214 584 aaKnown RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 MAPK12P53778 367 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 COX10Q12887 443 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 FAM182AQ5T1J6 154 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 GDF6Q6KF10 455 aaPredicted RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 CHST15Q7LFX5 561 aaPredicted RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 PID1Q7Z2X4 250 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 MAVSQ7Z434 540 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 PCDH20Q8N6Y1 951 aaKnown RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 NETO2Q8NC67 525 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 OR6F1Q8NGZ6 308 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 RORBQ92753 470 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 SLC45A3Q96JT2 553 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 BTN2A3PQ96KV6 586 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 MARK4Q96L34 752 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 DMRTB1Q96MA1 342 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 NPAS2Q99743 824 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 DSN1Q9H410 356 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 IFT22Q9H7X7 185 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 TBC1D13Q9NVG8 400 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 CCDC59Q9P031 241 aaKnown RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 HCN4Q9Y3Q4 1203 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 COMMD10Q9Y6G5 202 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 CEP290O15078 2479 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 SSC5DA1L4H1 1573 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 DHRS12A0PJE2 317 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 CCDC78A2IDD5 438 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 AQP12BA6NM10 295 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 NT5C1B-RDH14C9J2C7 533 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 TBC1D4O60343 1298 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 ITGBL1O95965 494 aaPredicted RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 SLC4A1P02730 911 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 IL7P13232 177 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 TFE3P19532 575 aaPredicted RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 ZNF45Q02386 682 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 BRMS1LQ5PSV4 323 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 C17orf99Q6UX52 265 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 PLEKHM3Q6ZWE6 761 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 ZNF438Q7Z4V0 828 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 NOXA1Q86UR1 476 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 NT5DC4Q86YG4 428 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 RAB43Q86YS6 212 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 MIB1Q86YT6 1006 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 CCDC117Q8IWD4 279 aaPredicted RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 AQP12AQ8IXF9 295 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 C8orf59Q8N0T1 100 aaPredicted RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 PSD4Q8NDX1 1056 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 MAGEE2Q8TD90 523 aaPredicted RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 B3GALT6Q96L58 329 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 SORT1Q99523 831 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 CLSTN3Q9BQT9 956 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 TM9SF3Q9HD45 589 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 MAT2BQ9NZL9 334 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 ACTR3BQ9P1U1 418 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 AP4E1Q9UPM8 1137 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 KCNE2Q9Y6J6 123 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 MYH9P35579 1960 aaKnown RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 ZNF646O15015 1829 aaPredicted RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 MYO7AQ13402 2215 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 A8MX80 341 aa7.79□□□□□ -1.16
SIK3-203ENST00000415541 ZNF99A8MXY4 864 aaPredicted RBP7.79□□□□□ -1.16
SIK3-203ENST00000415541 H3BUI4 141 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms