RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 PPARGP37231 505 aaPredicted RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 RAP1GAPP47736 663 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 ACADVLP49748 655 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 OLR1P78380 273 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 MPP3Q13368 585 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 TCTN1Q2MV58 587 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 EFHC1Q5JVL4 640 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 MPP7Q5T2T1 576 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 OGFOD3Q6PK18 319 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 ADGRD1Q6QNK2 874 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 UGT2A3Q6UWM9 527 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 MRPL10Q7Z7H8 261 aaKnown RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 CDH24Q86UP0 819 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 ZBED8Q8IZ13 594 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 SCML4Q8N228 414 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 BANPQ8N9N5 519 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 TMIGD2Q96BF3 282 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 BTBD6Q96KE9 485 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 WWP1Q9H0M0 922 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 EMC3Q9P0I2 261 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 MBD1Q9UIS9 605 aaPredicted RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 TUBD1Q9UJT1 453 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 SCN5AQ14524 2016 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 XKRY2A2RUG3 117 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 CHURC1-FNTBB4DL54 471 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 NDUFS8O00217 210 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 DENRO43583 198 aaKnown RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 NDUFS2O75306 463 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 ENO1P06733 434 aaKnown RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 ABCB1P08183 1280 aaPredicted RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 CDK4P11802 303 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 LAMP2P13473 410 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 CD58P19256 250 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 GTF2H1P32780 548 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 GRM5P41594 1212 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 MAGEA10P43363 369 aaPredicted RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 ATXN3P54252 364 aaPredicted RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 CSNK2BP67870 215 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 NOP14P78316 857 aaKnown RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 RPP38P78345 283 aaKnown RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 CDC42EP1Q00587 391 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 SOX4Q06945 474 aaPredicted RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 SPIDRQ14159 915 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 GPNMBQ14956 572 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 TMEM132DQ14C87 1099 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 DUOXA2Q1HG44 320 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 CYP27C1Q4G0S4 372 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 RFX6Q8HWS3 928 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 SLC22A9Q8IVM8 553 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 FAM71AQ8IYT1 594 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 MARVELD2Q8N4S9 558 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 GAB3Q8WWW8 586 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 SNX27Q96L92 541 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 PRRX2Q99811 253 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 NMUR2Q9GZQ4 415 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 WDR6Q9NNW5 1121 aaKnown RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 FAM86C1Q9NVL1 165 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 NXF1Q9UBU9 619 aaKnown RBP9.36□□□□□ -0.91
SNHG3-201ENST00000413987 SHOC2Q9UQ13 582 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 COQ4Q9Y3A0 265 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 XIRP2A4UGR9 3374 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 PMS2P1A4D2B8 440 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 CCDC160A6NGH7 325 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 GOLGA8SH3BPF8 625 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 I3L4J1 428 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 CYP26A1O43174 497 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ATMINO43313 823 aaPredicted RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 PSTPIP1O43586 416 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 CIDEAO60543 219 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 WEE2P0C1S8 567 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 NME1P15531 152 aaKnown RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 PRKACBP22694 351 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ALDH4A1P30038 563 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 CYP2C18P33260 490 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ZNF81P51508 661 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 TBL3Q12788 808 aaKnown RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 PDIA2Q13087 525 aaKnown RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 DCAF4L1Q3SXM0 396 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 FBXO43Q4G163 708 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 SFT2D3Q587I9 215 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 OVOS1Q6IE37 1185 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 USP37Q86T82 979 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 SLC47A2Q86VL8 602 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 COMTD1Q86VU5 262 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ARMC8Q8IUR7 673 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 DENND6AQ8IWF6 608 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 GPR150Q8NGU9 434 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 GDPD5Q8WTR4 605 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 STYXQ8WUJ0 223 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 LINC01599Q8WXQ3 324 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 PGAP3Q96FM1 320 aaPredicted RBP9.35□□□□□ -0.91
SNHG3-201ENST00000413987 PKP4Q99569 1192 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ADAM2Q99965 735 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 ABCG8Q9H221 673 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 USP29Q9HBJ7 922 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 FAM105AQ9NUU6 356 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 FAIMQ9NVQ4 179 aa9.35□□□□□ -0.91
SNHG3-201ENST00000413987 EHD3Q9NZN3 535 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms