RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 C16orf46Q6P387 395 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 KDELC2Q7Z4H8 507 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 PLXDC1Q8IUK5 500 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 NDUFAF2Q8N183 169 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 NIPA2Q8N8Q9 360 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 HSPH1Q92598 858 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 FATE1Q969F0 183 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF653Q96CK0 615 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 C9orf72Q96LT7 481 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 PLEKHG4BQ96PX9 1271 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 ISCUQ9H1K1 167 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 CARD9Q9H257 536 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 SCHIP1Q9P0W5 487 aaPredicted RBP12.02□□□□□ -0.49
LIMS2-210ENST00000413578 RCOR3Q9P2K3 495 aaPredicted RBP12.02□□□□□ -0.49
LIMS2-210ENST00000413578 KLHL3Q9UH77 587 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 RPL26L1Q9UNX3 145 aaKnown RBP12.02□□□□□ -0.49
LIMS2-210ENST00000413578 CHKBQ9Y259 395 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 BLACEA4D250 179 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 MATN3O15232 486 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 TOX3O15405 576 aaPredicted RBP12.01□□□□□ -0.49
LIMS2-210ENST00000413578 MFSD11O43934 449 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 RECKO95980 971 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 MYBL1P10243 752 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 SLC2A4P14672 509 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 XRCC1P18887 633 aaPredicted RBP12.01□□□□□ -0.49
LIMS2-210ENST00000413578 CES1P23141 567 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 GARSP41250 739 aaKnown RBP12.01□□□□□ -0.49
LIMS2-210ENST00000413578 SPINT3P49223 89 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 ARSEP51690 589 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 MLLT10P55197 1068 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 NIPAL4Q0D2K0 466 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 GALNT2Q10471 571 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 C6orf15Q6UXA7 325 aaPredicted RBP12.01□□□□□ -0.49
LIMS2-210ENST00000413578 CLEC17AQ6ZS10 378 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 AOPEPQ8N6M6 819 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 AVL9Q8NBF6 648 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 EID2BQ96D98 161 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 ULBP3Q9BZM4 244 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF768Q9H5H4 540 aaKnown RBP12.01□□□□□ -0.49
LIMS2-210ENST00000413578 MRPL47Q9HD33 250 aaKnown RBP12.01□□□□□ -0.49
LIMS2-210ENST00000413578 PRDM8Q9NQV8 689 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 AMACRQ9UHK6 382 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 CROTQ9UKG9 612 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 PCDHGA6Q9Y5G7 932 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 SLC30A1Q9Y6M5 507 aa12.01□□□□□ -0.49
LIMS2-210ENST00000413578 RGSL1A5PLK6 1076 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 CHUKO15111 745 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 GRID2O43424 1007 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 SNX2O60749 519 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 PDGFAP04085 211 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 CD48P09326 243 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF8P17098 575 aaPredicted RBP12□□□□□ -0.49
LIMS2-210ENST00000413578 DLSTP36957 453 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 SLC19A1P41440 591 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 MAPK9P45984 424 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 PMS2P54278 862 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 EPHB1P54762 984 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 SH3BP2P78314 561 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 PIGHQ14442 188 aaPredicted RBP12□□□□□ -0.49
LIMS2-210ENST00000413578 IL11RAQ14626 422 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 PAFAH1B3Q15102 231 aaKnown RBP12□□□□□ -0.49
LIMS2-210ENST00000413578 QPCTQ16769 361 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 NCBP2-AS2Q69YL0 99 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 TMEM26Q6ZUK4 368 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 PRSS42Q7Z5A4 293 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 TMEM135Q86UB9 458 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 APLFQ8IW19 511 aaPredicted RBP12□□□□□ -0.49
LIMS2-210ENST00000413578 CCDC13Q8IYE1 715 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 GALNT6Q8NCL4 622 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 TRIM11Q96F44 468 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 TSGA13Q96PP4 275 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 FAM83DQ9H4H8 585 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
LIMS2-210ENST00000413578 ANO10Q9NW15 660 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 SEMA5BQ9P283 1151 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 ATXN10Q9UBB4 475 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 POLHQ9Y253 713 aa12□□□□□ -0.49
LIMS2-210ENST00000413578 ICE1Q9Y2F5 2266 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 UTP20O75691 2785 aaKnown RBP11.99□□□□□ -0.49
LIMS2-210ENST00000413578 C1orf232A0A0U1RR37 186 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 MKRN2OSH3BPM6 223 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 RFPL1O75677 317 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 UBXN7O94888 489 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 HLA-DQB2P05538 268 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 MMP2P08253 660 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 KRT7P08729 469 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 FGF5P12034 268 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 CDK11BP21127 795 aaKnown RBP11.99□□□□□ -0.49
LIMS2-210ENST00000413578 LEPRP48357 1165 aaKnown RBP11.99□□□□□ -0.49
LIMS2-210ENST00000413578 PPM1FP49593 454 aaPredicted RBP11.99□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF165P49910 485 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 FOXM1Q08050 763 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 ITKQ08881 620 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 MMRN1Q13201 1228 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 ERV3-1Q14264 604 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 ASIC2Q16515 512 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 ANKRD20A8PQ5CZ79 823 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 ASB18Q6ZVZ8 466 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 PHYKPLQ8IUZ5 450 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms