RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 POMPQ9Y244 141 aa24.36■■□□□ 1.49
VRK2-202ENST00000412104 MTCL1Q9Y4B5 1905 aaKnown RBP24.36■■□□□ 1.49
VRK2-202ENST00000412104 KIAA0100Q14667 2235 aaKnown RBP24.36■■□□□ 1.49
VRK2-202ENST00000412104 PRAMEF1O95521 474 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 FGBP02675 491 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 HSPA1AP0DMV8 641 aaKnown RBP24.35■■□□□ 1.49
VRK2-202ENST00000412104 HSPA1BP0DMV9 641 aaKnown RBP24.35■■□□□ 1.49
VRK2-202ENST00000412104 STK19P49842 368 aaPredicted RBP24.35■■□□□ 1.49
VRK2-202ENST00000412104 CERS6Q6ZMG9 384 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 CPNE9Q8IYJ1 553 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 TRPC4APQ8TEL6 797 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 TCEAL4Q96EI5 215 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 NMRK1Q9NWW6 199 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 DNAJC15Q9Y5T4 150 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 IQCF5A8MTL0 148 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 FKBP6O75344 327 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 FGF4P08620 206 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 RPS17P08708 135 aaKnown RBP24.35■■□□□ 1.49
VRK2-202ENST00000412104 SRCP12931 536 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 ANPEPP15144 967 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 HLA-FP30511 346 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 HNF1BP35680 557 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 CCNIQ14094 377 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 CDKN3Q16667 212 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 GK5Q6ZS86 529 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 RIN3Q8TB24 985 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 HMGCLL1Q8TB92 370 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 GRIN3AQ8TCU5 1115 aa24.35■■□□□ 1.49
VRK2-202ENST00000412104 SARS2Q9NP81 518 aaKnown RBP24.35■■□□□ 1.49
VRK2-202ENST00000412104 CAPN8A6NHC0 703 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 PRMT5O14744 637 aaPredicted RBP24.34■■□□□ 1.49
VRK2-202ENST00000412104 KLK8O60259 260 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 CLDN7O95471 211 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 SERPINA4P29622 427 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 CLCN7P51798 805 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 CLCQ05315 142 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 GEN1Q17RS7 908 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 KANK2Q63ZY3 851 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 LARP4Q71RC2 724 aaKnown RBP eCLIP24.34■■□□□ 1.49
VRK2-202ENST00000412104 ZSWIM9Q86XI8 627 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 CCDC97Q96F63 343 aaPredicted RBP24.34■■□□□ 1.49
VRK2-202ENST00000412104 C3orf30Q96M34 536 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 EFCAB1Q9HAE3 211 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 PCDHB1Q9Y5F3 818 aa24.34■■□□□ 1.49
VRK2-202ENST00000412104 NCF1BA6NI72 391 aaPredicted RBP24.33■■□□□ 1.49
VRK2-202ENST00000412104 NCF1CA8MVU1 366 aaPredicted RBP24.33■■□□□ 1.49
VRK2-202ENST00000412104 STX16-NPEPL1H3BU86 382 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 STX16O14662 325 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 AZIN1O14977 448 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 NVLO15381 856 aaKnown RBP24.33■■□□□ 1.49
VRK2-202ENST00000412104 GPC4O75487 556 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 NCF1P14598 390 aaPredicted RBP24.33■■□□□ 1.49
VRK2-202ENST00000412104 FOXA1P55317 472 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 LCP2Q13094 533 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 FUT11Q495W5 492 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 FBXO48Q5FWF7 155 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 ANKS6Q68DC2 871 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 UGT3A1Q6NUS8 523 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 AAGABQ6PD74 315 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 SERPINA9Q86WD7 417 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 PGAM4Q8N0Y7 254 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 JADE3Q92613 823 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 C19orf43Q9BQ61 176 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 NDE1Q9NXR1 346 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 PPM1HQ9ULR3 514 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 CXorf51AA0A1B0GTR3 108 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 ATP6AP2A0A1C7CYW4 349 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 ATP6AP2O75787 350 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 CA5AP35218 305 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 PTK2BQ14289 1009 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 FASTKQ14296 549 aaKnown RBP24.33■■□□□ 1.49
VRK2-202ENST00000412104 TEAD2Q15562 447 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 MUM1Q2TAK8 710 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 BNC2Q6ZN30 1099 aaPredicted RBP24.33■■□□□ 1.49
VRK2-202ENST00000412104 SNX20Q7Z614 316 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 MRPL43Q8N983 215 aaKnown RBP24.33■■□□□ 1.49
VRK2-202ENST00000412104 TWIST2Q8WVJ9 160 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 VOPP1Q96AW1 172 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 C1QTNF3Q9BXJ4 246 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 S100A14Q9HCY8 104 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 HS3ST2Q9Y278 367 aa24.33■■□□□ 1.49
VRK2-202ENST00000412104 MYOFQ9NZM1 2061 aa24.33■■□□□ 1.48
VRK2-202ENST00000412104 RFPL2O75678 378 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 ENO3P13929 434 aaPredicted RBP24.32■■□□□ 1.48
VRK2-202ENST00000412104 CTNNB1P35222 781 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 EPHA5P54756 1037 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 SNRPD1P62314 119 aaKnown RBP24.32■■□□□ 1.48
VRK2-202ENST00000412104 PPIGQ13427 754 aaKnown RBP eCLIP24.32■■□□□ 1.48
VRK2-202ENST00000412104 NFATC2Q13469 925 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 ART3Q13508 389 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 C22orf39Q6P5X5 142 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 DNAJC9Q8WXX5 260 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 NAF1Q96HR8 494 aaKnown RBP24.32■■□□□ 1.48
VRK2-202ENST00000412104 KCNA7Q96RP8 456 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 SERPINI1Q99574 410 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 NPAS2Q99743 824 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 ASB8Q9H765 288 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 WDR41Q9HAD4 459 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 IL26Q9NPH9 171 aa24.32■■□□□ 1.48
VRK2-202ENST00000412104 SEMA4BQ9NPR2 832 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms