RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 AGBL3Q8NEM8 1001 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 DENND1AQ8TEH3 1009 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 EXOC4Q96A65 974 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 VCPIP1Q96JH7 1222 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 CABS1Q96KC9 395 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 FER1L6-AS2Q96M78 137 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 ACAT2Q9BWD1 397 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 IFIH1Q9BYX4 1025 aaKnown RBP5.17□□□□□ -1.58
LSM5-206ENST00000409987 CATSPERBQ9H7T0 1116 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 GPR108Q9NPR9 543 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 COQ3Q9NZJ6 369 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 UBA2Q9UBT2 640 aaPredicted RBP5.17□□□□□ -1.58
LSM5-206ENST00000409987 SEC63Q9UGP8 760 aaKnown RBP5.17□□□□□ -1.58
LSM5-206ENST00000409987 MOSPD1Q9UJG1 213 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 ERVK-11Q9UQG0 969 aa5.17□□□□□ -1.58
LSM5-206ENST00000409987 PTRH2Q9Y3E5 179 aaKnown RBP5.17□□□□□ -1.58
LSM5-206ENST00000409987 MTF2Q9Y483 593 aaPredicted RBP5.17□□□□□ -1.58
LSM5-206ENST00000409987 C1orf226A1L170 272 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 BECN2A8MW95 431 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 VCYO14598 125 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 STX6O43752 255 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 HS6ST1O60243 411 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 TPPPO94811 219 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 LCATP04180 440 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 SRPRAP08240 638 aaKnown RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 HOXA13P31271 388 aaPredicted RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 ABCG1P45844 678 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 MFAP4P55083 255 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 EVCP57679 992 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 COASYQ13057 564 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 CTTNQ14247 550 aaKnown RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 NFE2L1Q14494 772 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 HNF4GQ14541 408 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 NAB2Q15742 525 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 PRTGQ2VWP7 1150 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 PCGF3Q3KNV8 242 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 CRY2Q49AN0 593 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 SETMARQ53H47 684 aaPredicted RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 COLEC12Q5KU26 742 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 RAB12Q6IQ22 244 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 Q6ZTK2 550 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 DPPA4Q7L190 304 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 NUP54Q7Z3B4 507 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 MRPL10Q7Z7H8 261 aaKnown RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 RNF168Q8IYW5 571 aaPredicted RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 NRACQ8N912 160 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 SETD6Q8TBK2 473 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 TRIB2Q92519 343 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 RPL36ALQ969Q0 106 aaKnown RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 NLRP4Q96MN2 994 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 SEPT5Q99719 369 aaPredicted RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 FUT8Q9BYC5 575 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 KCNN2Q9H2S1 579 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 TSPY26PQ9H489 355 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 PLAC1Q9HBJ0 212 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 HINT3Q9NQE9 182 aaKnown RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 OR6C3Q9NZP0 311 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 DNAJB9Q9UBS3 223 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 ANAPC2Q9UJX6 822 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 R3HDM2Q9Y2K5 976 aaKnown RBP5.16□□□□□ -1.58
LSM5-206ENST00000409987 POMT1Q9Y6A1 747 aa5.16□□□□□ -1.58
LSM5-206ENST00000409987 TRBC2A0A5B9 178 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 OR2A25A4D2G3 310 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 CCDC69A6NI79 296 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 PSMD14O00487 310 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 TIMM23O14925 209 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 PPFIA2O75334 1257 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 SOX30O94993 753 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 C22orf31O95567 290 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 SLC4A1P02730 911 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 CYP1A2P05177 515 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 SNRNP70P08621 437 aaKnown RBP5.15□□□□□ -1.59
LSM5-206ENST00000409987 FDPSP14324 419 aaKnown RBP5.15□□□□□ -1.59
LSM5-206ENST00000409987 TMEM11P17152 192 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 CD58P19256 250 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 MAOAP21397 527 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 FBLP22087 321 aaKnown RBP5.15□□□□□ -1.59
LSM5-206ENST00000409987 PON1P27169 355 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 HOXC8P31273 242 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 MRPS5P82675 430 aaKnown RBP5.15□□□□□ -1.59
LSM5-206ENST00000409987 PPATQ06203 517 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 ACSM2AQ08AH3 577 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 ALCAMQ13740 583 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 SNTB1Q13884 538 aaKnown RBP5.15□□□□□ -1.59
LSM5-206ENST00000409987 MORF4L2Q15014 288 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 PPA1Q15181 289 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 C15orf59Q2T9L4 293 aaPredicted RBP5.15□□□□□ -1.59
LSM5-206ENST00000409987 ACSM2BQ68CK6 577 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 CASC1Q6TDU7 716 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 DLK2Q6UY11 383 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 SLC9B2Q86UD5 537 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 KBTBD6Q86V97 674 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 MIGA1Q8NAN2 632 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 LILRB1Q8NHL6 650 aaPredicted RBP5.15□□□□□ -1.59
LSM5-206ENST00000409987 KRT35Q92764 455 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 DGAT2Q96PD7 388 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 ACOX2Q99424 681 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 TMEM79Q9BSE2 394 aa5.15□□□□□ -1.59
LSM5-206ENST00000409987 NAA11Q9BSU3 229 aaPredicted RBP5.15□□□□□ -1.59
LSM5-206ENST00000409987 FOXP1Q9H334 677 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms