RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 COPS8Q99627 209 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 NR2E1Q9Y466 385 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 ACP5P13686 325 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 NELFEP18615 380 aaKnown RBP8.37□□□□□ -1.07
SCN9A-203ENST00000409672 FNIP1Q8TF40 1166 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 ACE2Q9BYF1 805 aaPredicted RBP8.37□□□□□ -1.07
SCN9A-203ENST00000409672 SEMA3GQ9NS98 782 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 KLRF1Q9NZS2 232 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 ACADLP28330 430 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 RAB25P57735 213 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 TAS2R50P59544 299 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 TXNL4AP83876 142 aaKnown RBP8.37□□□□□ -1.07
SCN9A-203ENST00000409672 PCID2Q5JVF3 399 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 CRTC1Q6UUV9 634 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM126BQ8IUX1 230 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 KREMEN2Q8NCW0 462 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 OR7D4Q8NG98 312 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 PIH1D2Q8WWB5 315 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 BHMG1C9JSJ3 638 aaPredicted RBP8.37□□□□□ -1.07
SCN9A-203ENST00000409672 SLCO1B7G3V0H7 640 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 PECAM1P16284 738 aaPredicted RBP8.37□□□□□ -1.07
SCN9A-203ENST00000409672 PPP3CAQ08209 521 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 FRG1Q14331 258 aaKnown RBP8.37□□□□□ -1.07
SCN9A-203ENST00000409672 ARHGAP40Q5TG30 622 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 LIN54Q6MZP7 749 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 IL31RAQ8NI17 732 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 CRELD1Q96HD1 420 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 TRIM2Q9C040 744 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 CDT1Q9H211 546 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 HMG20AQ9NP66 347 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 RPS6KA6Q9UK32 745 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 ANKRD6Q9Y2G4 727 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 TIMM22Q9Y584 194 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 ARFIP1P53367 373 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 C1QBPQ07021 282 aaKnown RBP8.37□□□□□ -1.07
SCN9A-203ENST00000409672 SPANXN2Q5MJ10 180 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 SLC34A3Q8N130 599 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM125Q96AQ2 219 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 IFT52Q9Y366 437 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 TNS2Q63HR2 1409 aa8.37□□□□□ -1.07
SCN9A-203ENST00000409672 STX11O75558 287 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 TRBC1P01850 177 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CALB2P22676 271 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 DRG2P55039 364 aaKnown RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ABATP80404 500 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CCZ1BP86790 482 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CCZ1P86791 482 aaPredicted RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CDKL1Q00532 357 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 PARP6Q2NL67 630 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 HSDL1Q3SXM5 330 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 INO80DQ53TQ3 878 aaPredicted RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 SPESP1Q6UW49 350 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 EFHD2Q96C19 240 aaPredicted RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 NDC1Q9BTX1 674 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 PABPC3Q9H361 631 aaKnown RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 PCDH9Q9HC56 1237 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 MRPS30Q9NP92 439 aaKnown RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 TRPM1Q7Z4N2 1603 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 TMCC2O75069 709 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ATP9AO75110 1047 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 MTX2O75431 263 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 SCGB1D2O95969 90 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 DGKGP49619 791 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 MAN2A2P49641 1150 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 OXR1Q8N573 874 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF615Q8N8J6 731 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF557Q8N988 423 aaPredicted RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 OR6K6Q8NGW6 343 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 TRMT10AQ8TBZ6 339 aaKnown RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 MR1Q95460 341 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CHST7Q9NS84 486 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 MRGBPQ9NV56 204 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CREB5Q02930 508 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 OR2AJ1Q8NGZ0 328 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF510Q9Y2H8 683 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 LOC100509620A0A075B734 347 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 GSC2O15499 205 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 RARAP10276 462 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ATP4AP20648 1035 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CYP3A5P20815 502 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CAPSQ13938 189 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 DLG2Q15700 870 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 SPIN3Q5JUX0 258 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 TTLL10Q6ZVT0 673 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 RBFAQ8N0V3 343 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 SVOPQ8N4V2 548 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 HMCESQ96FZ2 354 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 DGAT2Q96PD7 388 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 IL25Q9H293 177 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 DPEP3Q9H4B8 488 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 IFT46Q9NQC8 304 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CENPMQ9NSP4 180 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 IL36AQ9UHA7 158 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CYP8B1Q9UNU6 501 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF726A6NNF4 738 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF879B4DU55 563 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 MNDAP41218 407 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 MAPK12P53778 367 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 EVX2Q03828 476 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 SLC24A5Q71RS6 500 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms