RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 XKR6Q5GH73 641 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 FAM45BPQ6NSW5 357 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 FAM45AQ8TCE6 357 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 HEXDCQ8WVB3 486 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 MAGEB18Q96M61 343 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 FCRL3Q96P31 734 aaPredicted RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 COPS7BQ9H9Q2 264 aaPredicted RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 PCDH12Q9NPG4 1184 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 SLC12A4Q9UP95 1085 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 OR1A2Q9Y585 309 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 MICAL3Q7RTP6 2002 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 UBOX5O94941 541 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 F11P03951 625 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 MPSTP25325 297 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 CNTFP26441 200 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 GRK3P35626 688 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 HCAR3P49019 387 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 NAIF1Q69YI7 327 aaPredicted RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 NPAS3Q8IXF0 933 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 UMODL1-AS1Q8N2C9 162 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 PHC3Q8NDX5 983 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 MRGPRX2Q96LB1 330 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 SIGLEC10Q96LC7 697 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 PSKH2Q96QS6 385 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 RPP25Q9BUL9 199 aaKnown RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 KLF16Q9BXK1 252 aaPredicted RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 ABCG4Q9H172 646 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 TCF7L2Q9NQB0 619 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 MARCH4Q9P2E8 410 aaPredicted RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 PLAGL1Q9UM63 463 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 MRPS17Q9Y2R5 130 aaKnown RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 H2AFYO75367 372 aaKnown RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 ALOX15P16050 662 aaPredicted RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 CD68P34810 354 aaPredicted RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 NRG1Q02297 640 aaPredicted RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 ELP6Q0PNE2 266 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 GRIN2CQ14957 1233 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 RASA2Q15283 850 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 FAM46DQ8NEK8 389 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 SAMD11Q96NU1 681 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 HHIPQ96QV1 700 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 DZANK1Q9NVP4 752 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.33□□□□□ -0.6
SNX13-202ENST00000409604 CA5BQ9Y2D0 317 aa11.33□□□□□ -0.6
SNX13-202ENST00000409604 IGLON5A6NGN9 336 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 RECQL5O94762 991 aaPredicted RBP11.32□□□□□ -0.6
SNX13-202ENST00000409604 DNAJB1P25685 340 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 SLC20A2Q08357 652 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 RAB41Q5JT25 222 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 DRICH1Q6PGQ1 229 aaPredicted RBP11.32□□□□□ -0.6
SNX13-202ENST00000409604 FSTL5Q8N475 847 aaPredicted RBP11.32□□□□□ -0.6
SNX13-202ENST00000409604 C1orf74Q96LT6 269 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 BTBD1Q9H0C5 482 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 KLC4Q9NSK0 619 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.32□□□□□ -0.6
SNX13-202ENST00000409604 SDC3O75056 442 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 NUDT17P0C025 328 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 SRCP12931 536 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 RPIAP49247 311 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 NEK3P51956 506 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 TFF2Q03403 129 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 PPP4R4Q6NUP7 873 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 TMPRSS11BQ86T26 416 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 GALNT13Q8IUC8 556 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 LMNTD1Q8N9Z9 388 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 SLC43A3Q8NBI5 491 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 ICA1LQ8NDH6 482 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 MRPL1Q9BYD6 325 aaKnown RBP11.32□□□□□ -0.6
SNX13-202ENST00000409604 RUBCNLQ9H714 662 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 PRDM16Q9HAZ2 1276 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 EPS15L1Q9UBC2 864 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 RAB23Q9ULC3 237 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 LRRC72A6NJI9 287 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 SAP18O00422 153 aaKnown RBP11.32□□□□□ -0.6
SNX13-202ENST00000409604 CCR10P46092 362 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 C21orf59P57076 290 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 KCNK10P57789 538 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 QPCTQ16769 361 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
SNX13-202ENST00000409604 ZNF761Q86XN6 746 aaPredicted RBP11.32□□□□□ -0.6
SNX13-202ENST00000409604 PHYKPLQ8IUZ5 450 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 RPLP0P6Q8NHW5 317 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 VN1R3Q9BXE9 311 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 RIC8BQ9NVN3 520 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 ARIH1Q9Y4X5 557 aaPredicted RBP11.32□□□□□ -0.6
SNX13-202ENST00000409604 SPO11Q9Y5K1 396 aa11.32□□□□□ -0.6
SNX13-202ENST00000409604 CYP7B1O75881 506 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 CLCNKAP51800 687 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 RFLNAQ6ZTI6 216 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
SNX13-202ENST00000409604 LONP2Q86WA8 852 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 PCDH20Q8N6Y1 951 aaKnown RBP11.31□□□□□ -0.6
SNX13-202ENST00000409604 ASZ1Q8WWH4 475 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 CENPIQ92674 756 aaPredicted RBP11.31□□□□□ -0.6
SNX13-202ENST00000409604 RBBP8Q99708 897 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 EIF2B4Q9UI10 523 aaKnown RBP11.31□□□□□ -0.6
SNX13-202ENST00000409604 ARHGAP26Q9UNA1 814 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 CPED1A4D0V7 1026 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms