RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MPP3Q13368 585 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 GALNT3Q14435 633 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 KAZNQ674X7 775 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 PID1Q7Z2X4 250 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 LYSMD3Q7Z3D4 306 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 SFRP1Q8N474 314 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 OR4D9Q8NGE8 314 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 HAUS1Q96CS2 278 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 WBP1Q96G27 269 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 FCRL3Q96P31 734 aaPredicted RBP14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 SMIM14Q96QK8 99 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 KCNK17Q96T54 332 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 HERPUD2Q9BSE4 406 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 SPATA16Q9BXB7 569 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 EPB41L1Q9H4G0 881 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 SARS2Q9NP81 518 aaKnown RBP14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 RALYQ9UKM9 306 aaKnown RBP14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 ST14Q9Y5Y6 855 aa14.4□□□□□ -0.1
NIF3L1-205ENST00000409588 BPTFQ12830 3046 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 KIR2DS5A0A0G2JLQ3 304 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 A0A0G2JNG1 304 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 A0A0U1RQS6 177 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 EIF4E1BA6NMX2 242 aaKnown RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 KIR2DS3K7RE56 304 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 KLK10O43240 276 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 GRID2O43424 1007 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 ANXA9O76027 345 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 MT-CYBP00156 380 aaPredicted RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 HLA-DPA1P20036 260 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 CD1CP29017 333 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 PTPN7P35236 360 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 NAP1L1P55209 391 aaKnown RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 RWDD2BP57060 319 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 KIR2DS5Q14953 304 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 PCSK7Q16549 785 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 SOWAHCQ53LP3 525 aaPredicted RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 ZNF569Q5MCW4 686 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 CCDC181Q5TID7 509 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 IYDQ6PHW0 289 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 FOXR1Q6PIV2 292 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 CHST15Q7LFX5 561 aaPredicted RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 KDELC2Q7Z4H8 507 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 B3GNT8Q7Z7M8 397 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 SLC9B2Q86UD5 537 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 ZC3H18Q86VM9 953 aaKnown RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 SLITRK4Q8IW52 837 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 SPATA22Q8NHS9 363 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 GLYATL1Q969I3 302 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 LRRC45Q96CN5 670 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 EID2BQ96D98 161 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 VPS35Q96QK1 796 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 C19orf43Q9BQ61 176 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 SUDS3Q9H7L9 328 aaPredicted RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 KLHL8Q9P2G9 620 aaPredicted RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 IMPACTQ9P2X3 320 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 SAE1Q9UBE0 346 aaPredicted RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 AAR2Q9Y312 384 aaKnown RBP14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 ZNF711Q9Y462 761 aa14.39□□□□□ -0.11
NIF3L1-205ENST00000409588 FADS2P1A8MWK0 482 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 CHUKO15111 745 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 KMOO15229 486 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 PPM1DO15297 605 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 PJA2O43164 708 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 PMPCBO75439 489 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 STK10O94804 968 aaKnown RBP14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 TJP3O95049 919 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 ATP1A1P05023 1023 aaKnown RBP14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 SLC5A2P31639 672 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 LIMK2P53671 638 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 MAZP56270 477 aaKnown RBP14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 WNT3AP56704 352 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 OR1D5P58170 312 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 RHDQ02161 417 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 MAP9Q49MG5 647 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 ITPRIPL1Q6GPH6 555 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 TMEM71Q6P5X7 295 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 WDR74Q6RFH5 385 aaPredicted RBP14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 MARK2Q7KZI7 788 aaKnown RBP14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 PHYKPLQ8IUZ5 450 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 SYCE1Q8N0S2 351 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 GPR26Q8NDV2 337 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 CCDC112Q8NEF3 446 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 OR10G6Q8NH81 332 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 AHCYL2Q96HN2 611 aaKnown RBP14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 QKIQ96PU8 341 aaKnown RBP eCLIP14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 SLC38A3Q99624 504 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 CEP41Q9BYV8 373 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 FOXP3Q9BZS1 431 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 RBSNQ9H1K0 784 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 KCNK4Q9NYG8 393 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 PDP2Q9P2J9 529 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 SHOC2Q9UQ13 582 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 LOXL2Q9Y4K0 774 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 UNC13CQ8NB66 2214 aa14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 COL27A1Q8IZC6 1860 aaPredicted RBP14.38□□□□□ -0.11
NIF3L1-205ENST00000409588 IGSF10Q6WRI0 2623 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 CACNA1GO43497 2377 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 IGHV1OR21-1A0A087WYE8 117 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 F3P13726 295 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 PECAM1P16284 738 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms