RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 DFNA5O60443 496 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 DDHD2O94830 711 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 ATG7O95352 703 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 SEC24AO95486 1093 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 VNN1O95497 513 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 CALCAP01258 141 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 KRT19P08727 400 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 GFAPP14136 432 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 SELPP16109 830 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 EEF1B2P24534 225 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 OR3A3P47888 321 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 NR2C2P49116 596 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 NDST1P52848 882 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 GP2P55259 537 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 YWHAEP62258 255 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 TAF5Q15542 800 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 ATAD3CQ5T2N8 411 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 SYT6Q5T7P8 510 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 SLC39A4Q6P5W5 647 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 PIWIL3Q7Z3Z3 882 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 C8orf59Q8N0T1 100 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 TMEM151AQ8N4L1 468 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 WDTC1Q8N5D0 677 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 PCDH20Q8N6Y1 951 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 CCDC185Q8N715 623 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 PLD5Q8N7P1 536 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 GALNT11Q8NCW6 608 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 BLOC1S5Q8TDH9 187 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 STYXQ8WUJ0 223 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 JPH3Q8WXH2 748 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 MCMBPQ9BTE3 642 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 PI4K2AQ9BTU6 479 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 MEAF6Q9HAF1 191 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 TXNDC16Q9P2K2 825 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 WARS2Q9UGM6 360 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 ZDHHC2Q9UIJ5 367 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 STAP1Q9ULZ2 295 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 PDE10AQ9Y233 779 aa10.58□□□□□ -0.72
NIF3L1-204ENST00000409357 CLDN24A6NM45 220 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 SNTNA6NMZ2 147 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 TARM1B6A8C7 271 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 CCRL2O00421 344 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 SLC16A4O15374 487 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 DHX15O43143 795 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 APOA1P02647 267 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 YES1P07947 543 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 CTSHP09668 335 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 THPOP40225 353 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 RPS5P46782 204 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 GRIA4P48058 902 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ZNF135P52742 658 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 SRP54P61011 504 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ACTR2P61160 394 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 DAG1Q14118 895 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 FASTKQ14296 549 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ZFP69Q49AA0 526 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 LDLRAP1Q5SW96 308 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 UBE2UQ5VVX9 321 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 FAM171BQ6P995 826 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 KCNT2Q6UVM3 1135 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ZNF767PQ75MW2 155 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 BEND5Q7L4P6 421 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 PIWIL4Q7Z3Z4 852 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 R3HCC1LQ7Z5L2 792 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 GLRX5Q86SX6 157 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 WDR49Q8IV35 697 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 GALNT12Q8IXK2 581 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 POC5Q8NA72 575 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 SMG8Q8ND04 991 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 PJA1Q8NG27 643 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 HMGCLL1Q8TB92 370 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 SLC22A17Q8WUG5 538 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 SEPT1Q8WYJ6 367 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 PROX1Q92786 737 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ACSF2Q96CM8 615 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 CEP19Q96LK0 163 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 MUS81Q96NY9 551 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 TBCBQ99426 244 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 CDX2Q99626 313 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 IL12RB2Q99665 862 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 COQ7Q99807 217 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 TMEM246Q9BRR3 403 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ZNF577Q9BSK1 485 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ASPSCR1Q9BZE9 553 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ING2Q9H160 280 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 APOBEC3GQ9HC16 384 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ACOXLQ9NUZ1 547 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 USE1Q9NZ43 259 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 USP18Q9UMW8 372 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 EVPLQ92817 2033 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 A0A096LPK6 155 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 TCRBV5S2A0A599 114 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 TYW5A2RUC4 315 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 HMX3A6NHT5 357 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 AGAP5A6NIR3 686 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 PDZK1P1A8MUH7 402 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 UBXN8O00124 270 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 APOL1O14791 398 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms