RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NAF1Q96HR8 494 aaKnown RBP9□□□□□ -0.97
SNORD88A-201ENST00000408314 VPS35Q96QK1 796 aa9□□□□□ -0.97
SNORD88A-201ENST00000408314 SLC38A3Q99624 504 aa9□□□□□ -0.97
SNORD88A-201ENST00000408314 FOXP3Q9BZS1 431 aa9□□□□□ -0.97
SNORD88A-201ENST00000408314 TRIM39Q9HCM9 518 aa9□□□□□ -0.97
SNORD88A-201ENST00000408314 SARS2Q9NP81 518 aaKnown RBP9□□□□□ -0.97
SNORD88A-201ENST00000408314 RSPH14Q9UHP6 348 aa9□□□□□ -0.97
SNORD88A-201ENST00000408314 TMEM98Q9Y2Y6 226 aa9□□□□□ -0.97
SNORD88A-201ENST00000408314 PCDHB11Q9Y5F2 797 aa9□□□□□ -0.97
SNORD88A-201ENST00000408314 WDFY3Q8IZQ1 3526 aa9□□□□□ -0.97
SNORD88A-201ENST00000408314 COL27A1Q8IZC6 1860 aaPredicted RBP9□□□□□ -0.97
SNORD88A-201ENST00000408314 MACROD2A1Z1Q3 448 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 KLHL33A6NCF5 533 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 FADS2P1A8MWK0 482 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 MIF4GDA9UHW6 222 aaKnown RBP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 H7C0C1 242 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ERVH48-1M5A8F1 160 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 KMOO15229 486 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ATXN7O15265 892 aaPredicted RBP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 GRID2O43424 1007 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 NUAK1O60285 661 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 TJP3O95049 919 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 LIPCP11150 499 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ACP5P13686 325 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 F3P13726 295 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 NFKB1P19838 968 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 FECHP22830 423 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 CSTF2P33240 577 aaKnown RBP eCLIP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 PTPN7P35236 360 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ATP5OP48047 213 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 GEMP55040 296 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 WNT3AP56704 352 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 RWDD2BP57060 319 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 RAB15P59190 212 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 PDE1BQ01064 536 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 HHEXQ03014 270 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 VAC14Q08AM6 782 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ITGA9Q13797 1035 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 PRPSAP1Q14558 356 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 INSCQ1MX18 579 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ALS2CLQ60I27 953 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 CCDC81Q6ZN84 652 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 RFLNAQ6ZTI6 216 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 NYAP1Q6ZVC0 841 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 CHST15Q7LFX5 561 aaPredicted RBP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 LRRTM4Q86VH4 590 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ZC3H18Q86VM9 953 aaKnown RBP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 RBM12BQ8IXT5 1001 aaKnown RBP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 SFRP1Q8N474 314 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 UBL4BQ8N7F7 174 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 TTC13Q8NBP0 860 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 AGBL5Q8NDL9 886 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 OR4D9Q8NGE8 314 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 SLC37A2Q8TED4 501 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 LRRN4Q8WUT4 740 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 WBP1Q96G27 269 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 PRR11Q96HE9 360 aaPredicted RBP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 TTC25Q96NG3 672 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 FCRL5Q96RD9 977 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 AGAP2Q99490 1192 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 TIMM29Q9BSF4 260 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 IMPACTQ9P2X3 320 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 PISDQ9UG56 409 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ATXN7L1Q9ULK2 861 aaPredicted RBP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 SHOC2Q9UQ13 582 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 AAR2Q9Y312 384 aaKnown RBP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 PKP3Q9Y446 797 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 HYOU1Q9Y4L1 999 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 PCDHA3Q9Y5H8 950 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ARHGEF17Q96PE2 2063 aaPredicted RBP8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 ATRXP46100 2492 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 UNC13CQ8NB66 2214 aa8.99□□□□□ -0.97
SNORD88A-201ENST00000408314 IGSF10Q6WRI0 2623 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 IGHV1OR21-1A0A087WYE8 117 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 LOC285095A0A1B0GVY8 99 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 PJA2O43164 708 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 B4GAT1O43505 415 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 DNAJC6O75061 913 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 MT-CYBP00156 380 aaPredicted RBP8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 FUCA1P04066 466 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 ATP1A1P05023 1023 aaKnown RBP8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 PECAM1P16284 738 aaPredicted RBP8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 SLC5A2P31639 672 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 SPAM1P38567 509 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 ATP1A2P50993 1020 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 VAV2P52735 878 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 LIMK2P53671 638 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 OR1D5P58170 312 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 WASHC5Q12768 1159 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 KIF5AQ12840 1032 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 IHHQ14623 411 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 NOMO1Q15155 1222 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 PTPRRQ15256 657 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 LDLRAP1Q5SW96 308 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 TMEM71Q6P5X7 295 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 CYB5D1Q6P9G0 228 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 KDELC2Q7Z4H8 507 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 GLT6D1Q7Z4J2 308 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 TRIM48Q8IWZ4 208 aa8.98□□□□□ -0.97
SNORD88A-201ENST00000408314 ZNF567Q8N184 647 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms