RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CLCN2P51788 898 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 CLCN4P51793 760 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 TAF12Q16514 161 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 PABPC1LQ4VXU2 614 aaKnown RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 AARS2Q5JTZ9 985 aaKnown RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 C6orf52Q5T4I8 152 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 NCEH1Q6PIU2 408 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 LINGO4Q6UY18 593 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 FAM43BQ6ZT52 329 aaPredicted RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 SPATA19Q7Z5L4 167 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 TTC30BQ8N4P2 665 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 LRTOMTQ8WZ04 291 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 WBP2Q969T9 261 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 LINGO1Q96FE5 620 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 SPATA16Q9BXB7 569 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 KLF16Q9BXK1 252 aaPredicted RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 ABCD2Q9UBJ2 740 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 PCTPQ9UKL6 214 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 FNDC3AQ9Y2H6 1198 aaKnown RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 SNAP91O60641 907 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 TSPAN12O95859 305 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 CD160O95971 181 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 C1RP00736 705 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 AGTR2P50052 363 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 POLE2P56282 527 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 IL2P60568 153 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 CDKL1Q00532 357 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 PLD1Q13393 1074 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 PITRM1Q5JRX3 1037 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 IRAK1BP1Q5VVH5 260 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 OGFOD2Q6N063 350 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 KIAA1841Q6NSI8 718 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 ZNF783Q6ZMS7 281 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 SYVN1Q86TM6 617 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 MINDY1Q8N5J2 469 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 SPDYE1Q8NFV5 336 aaPredicted RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 CD200R1Q8TD46 325 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 KCNJ9Q92806 393 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.71■□□□□ 0.27
NUP50-203ENST00000407019 LRCH3Q96II8 777 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 MYRFLQ96LU7 910 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 UHRF1Q96T88 793 aaPredicted RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 RNF38Q9H0F5 515 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 SEMA6AQ9H2E6 1030 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 IL1RL2Q9HB29 575 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 GID8Q9NWU2 228 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 CNOT6Q9ULM6 557 aaKnown RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 TIMM22Q9Y584 194 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 COMMD10Q9Y6G5 202 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 GBF1Q92538 1859 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 C2orf78A6NCI8 922 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 E5RI56 91 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 H0YJX3 145 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 H7C0S8 307 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 NME4O00746 187 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 SNX2O60749 519 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 CSPG5O95196 566 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 ESRRBO95718 433 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 CHEK2O96017 543 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 PABPC4LP0CB38 370 aaKnown RBP16.7■□□□□ 0.26
NUP50-203ENST00000407019 ZNF26P17031 533 aaPredicted RBP16.7■□□□□ 0.26
NUP50-203ENST00000407019 ECT2LQ008S8 904 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 RBBP7Q16576 425 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 CNPY1Q3B7I2 92 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 COQ5Q5HYK3 327 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 NAIF1Q69YI7 327 aaPredicted RBP16.7■□□□□ 0.26
NUP50-203ENST00000407019 GPSM1Q86YR5 675 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 AHI1Q8N157 1196 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 GALNT15Q8N3T1 639 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 OR2T34Q8NGX1 318 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 OR2T3Q8NH03 318 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 HGH1Q9BTY7 390 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 VN1R3Q9BXE9 311 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 SEZ6LQ9BYH1 1024 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 TRIM15Q9C019 465 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 LHX3Q9UBR4 397 aa16.7■□□□□ 0.26
NUP50-203ENST00000407019 ZNF839A8K0R7 811 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 C9JVG2 144 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 KIF3CO14782 793 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 ESR1P03372 595 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 PRR35P0CG20 571 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 UROSP10746 265 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 CHRM3P20309 590 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 ATP6V1B2P21281 511 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 FOXM1Q08050 763 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 THEMIS2Q5TEJ8 643 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 TAS2R42Q7RTR8 314 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 CPNE9Q8IYJ1 553 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 OR56A4Q8NGH8 313 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 EEF1AKMT1Q8WVE0 214 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 ZUFSPQ96AP4 578 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 CD274Q9NZQ7 290 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 GMPR2Q9P2T1 348 aaKnown RBP16.69■□□□□ 0.26
NUP50-203ENST00000407019 YIPF1Q9Y548 306 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 SNX13Q9Y5W8 968 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 GPR45Q9Y5Y3 372 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 H0Y626 953 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 FXYD1O00168 92 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 GIPC1O14908 333 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 TNFAIP8O95379 198 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms