RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CXCR3P49682 368 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 IFITM2Q01629 132 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 TAF1CQ15572 869 aaPredicted RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 COLEC12Q5KU26 742 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 SLC27A1Q6PCB7 646 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 MMAAQ8IVH4 418 aaKnown RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 MIER2Q8N344 545 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 FBXO30Q8TB52 745 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 ZNF486Q96H40 463 aaPredicted RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 ZFYVE19Q96K21 471 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 MLPHQ9BV36 600 aaPredicted RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 MID1IP1Q9NPA3 183 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 IFT52Q9Y366 437 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 FAM72CH0Y354 149 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 NPHS1O60500 1241 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 CDH1P12830 882 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 ERCC2P18074 760 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 ARSFP54793 590 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 DIO3P55073 304 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 IL5RAQ01344 420 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 MFSD10Q14728 455 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 DGUOKQ16854 277 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 FAM72AQ5TYM5 149 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 TWF2Q6IBS0 349 aaKnown RBP16.98■□□□□ 0.31
PTPRA-205ENST00000399903 FAM72DQ6L9T8 149 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 FAM72BQ86X60 149 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 ZNF555Q8NEP9 628 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 PTCD2Q8WV60 388 aaKnown RBP16.98■□□□□ 0.31
PTPRA-205ENST00000399903 LPPQ93052 612 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 ISL2Q96A47 359 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 ZUFSPQ96AP4 578 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 EFHD2Q96C19 240 aaPredicted RBP16.98■□□□□ 0.31
PTPRA-205ENST00000399903 BIRC7Q96CA5 298 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 OSBPL10Q9BXB5 764 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 TRIM39Q9HCM9 518 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 CRHBPP24387 322 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 SLC1A2P43004 574 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 LEPRP48357 1165 aaKnown RBP16.98■□□□□ 0.31
PTPRA-205ENST00000399903 PSMD8P48556 350 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 PCSK7Q16549 785 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 NDUFA5Q16718 116 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 CST9Q5W186 159 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 SPESP1Q6UW49 350 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 SPATC1Q76KD6 591 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 OR52K2Q8NGK3 314 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 SLC2A14Q8TDB8 520 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 NODALQ96S42 347 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 MOSPD1Q9UJG1 213 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 MICAL3Q7RTP6 2002 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 HS6ST1O60243 411 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 CCNKO75909 580 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 ALOX12P18054 663 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 SERPINB10P48595 397 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 PLA2G4EQ3MJ16 856 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 ZNF789Q5FWF6 425 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 GTF2IRD2BQ6EKJ0 949 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 BNIPLQ7Z465 357 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 GTF2IRD2Q86UP8 949 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 C17orf80Q9BSJ5 609 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 RHOBTB2Q9BYZ6 727 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 MEAF6Q9HAF1 191 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 GPSM3Q9Y4H4 160 aa16.98■□□□□ 0.31
PTPRA-205ENST00000399903 SMIM28A0A1B0GU29 152 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 ILVBLA1L0T0 632 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 CCDC162PA2VCL2 907 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 UBFD1O14562 309 aaKnown RBP16.97■□□□□ 0.31
PTPRA-205ENST00000399903 PIP5K1BO14986 540 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 CYP4B1P13584 511 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 ZNF157P51786 506 aaPredicted RBP16.97■□□□□ 0.31
PTPRA-205ENST00000399903 VAC14Q08AM6 782 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 NOTUMQ6P988 496 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 TBC1D21Q8IYX1 336 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 PNPT1Q8TCS8 783 aaKnown RBP16.97■□□□□ 0.31
PTPRA-205ENST00000399903 S100ZQ8WXG8 99 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 RORBQ92753 470 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 RPL3LQ92901 407 aaKnown RBP16.97■□□□□ 0.31
PTPRA-205ENST00000399903 EMID1Q96A84 441 aaPredicted RBP16.97■□□□□ 0.31
PTPRA-205ENST00000399903 NSMCE2Q96MF7 247 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 FEM1AQ9BSK4 669 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 LRRC4Q9HBW1 653 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 NMRK2Q9NPI5 230 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 CNGB3Q9NQW8 809 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 DARSP14868 501 aaKnown RBP16.97■□□□□ 0.31
PTPRA-205ENST00000399903 ATICP31939 592 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 ADARB1P78563 741 aaKnown RBP16.97■□□□□ 0.31
PTPRA-205ENST00000399903 BNIP2Q12982 314 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 SNX17Q15036 470 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 FAM110CQ1W6H9 321 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 C9orf57Q5W0N0 161 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 DCBLD1Q8N8Z6 715 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 CNIH3Q8TBE1 160 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 OSCP1Q8WVF1 389 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 ROPN1LQ96C74 230 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 HOPXQ9BPY8 73 aaPredicted RBP16.97■□□□□ 0.31
PTPRA-205ENST00000399903 CYP3A43Q9HB55 503 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 AKIP1Q9NQ31 210 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 INTS10Q9NVR2 710 aaKnown RBP16.97■□□□□ 0.31
PTPRA-205ENST00000399903 SARDHQ9UL12 918 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 INVSQ9Y283 1065 aa16.97■□□□□ 0.31
PTPRA-205ENST00000399903 TARM1B6A8C7 271 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms