RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 FAM117AQ9C073 453 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 GRIP2Q9C0E4 1043 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 LACRTQ9GZZ8 138 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 CARS2Q9HA77 564 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 GLS2Q9UI32 602 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 CDC14AQ9UNH5 594 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 MDFIC2A0A1B0GVS7 189 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 UGT1A1P22309 533 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 CRABP2P29373 138 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 TMEM63BQ5T3F8 832 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 NAIF1Q69YI7 327 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 SLC29A4Q7RTT9 530 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 TMC8Q8IU68 726 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 SLC22A15Q8IZD6 547 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 OR4K17Q8NGC6 315 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 ATG4AQ8WYN0 398 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 PPP1R14BQ96C90 147 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 PRICKLE1Q96MT3 831 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 AARSD1Q9BTE6 412 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 KLRF1Q9NZS2 232 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 PTCH2Q9Y6C5 1203 aa10.93□□□□□ -0.66
CACNA1C-210ENST00000399606 MDM4O15151 490 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 HSF2Q03933 536 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 MBTD1Q05BQ5 628 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 C1orf94Q6P1W5 598 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 ITCHQ96J02 903 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 SGK2Q9HBY8 427 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 CLN6Q9NWW5 311 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 MTRRQ9UBK8 725 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 CLCA3PQ9Y6N3 262 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 IFT172Q9UG01 1749 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 ZNF726A6NNF4 738 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 E5RJQ4 531 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 CDK14O94921 469 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 C1RP00736 705 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 HEXBP07686 556 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 AHCYP23526 432 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 RAB39AQ14964 217 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 SPANXN3Q5MJ09 141 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 DEF8Q6ZN54 512 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 ZBTB46Q86UZ6 589 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 LRRC17Q8N6Y2 441 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 SPPL2BQ8TCT7 592 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 ADAMTS15Q8TE58 950 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 ASPNQ9BXN1 380 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 SEMA3GQ9NS98 782 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 RBMX2Q9Y388 322 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 CAPN6Q9Y6Q1 641 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 CEP170BQ9Y4F5 1589 aaPredicted RBP10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 A0A1W2PRU2 124 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 TSPAN4O14817 238 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 TREHO43280 583 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 FGFR3P22607 806 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 TTPAP49638 278 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 TIMM50Q3ZCQ8 353 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 TTMPQ5BVD1 217 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 UBE2R2Q712K3 238 aaPredicted RBP10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 EIF3MQ7L2H7 374 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 IQCKQ8N0W5 287 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 OR2L3Q8NG85 312 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 OR6Y1Q8NGX8 325 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 RNF145Q96MT1 663 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 FNDC11Q9BVV2 318 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 DIP2CQ9Y2E4 1556 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 SCGB1D2O95969 90 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 PRH1P02810 166 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 PRKCHP24723 683 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 MYL9P24844 172 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 S100A2P29034 98 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 SMARCB1Q12824 385 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 HYAL2Q12891 473 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 GRTP1Q5TC63 336 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 THAP5Q7Z6K1 395 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 PPTC7Q8NI37 304 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 ITFG1Q8TB96 612 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 S100ZQ8WXG8 99 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 ARMC5Q96C12 935 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 DGCR6LQ9BY27 220 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 EXD2Q9NVH0 621 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 IKZF2Q9UKS7 526 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 PCDHGC5Q9Y5F6 944 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 FOXN3O00409 490 aaPredicted RBP10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 MC4RP32245 332 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 ACTR1BP42025 376 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 ACTR1AP61163 376 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 CITED4Q96RK1 184 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 SERINC1Q9NRX5 453 aa10.92□□□□□ -0.66
CACNA1C-210ENST00000399606 RRP8O43159 456 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 ADH5P11766 374 aa10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 TCF4P15884 667 aa10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 MTHFRP42898 656 aa10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 TOB1P50616 345 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 FGL2Q14314 439 aa10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 TRMT5Q32P41 509 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 LINGO4Q6UY18 593 aa10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 KBTBD2Q8IY47 623 aa10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 CCDC36Q8IYA8 594 aa10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 SIDT2Q8NBJ9 832 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-210ENST00000399606 ATAD1Q8NBU5 361 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms