RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 VPS26AO75436 327 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 NDUFS3O75489 264 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 UBOX5O94941 541 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 CTSLP07711 333 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 RPS17P08708 135 aaKnown RBP6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 TIMP2P16035 220 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 GM2AP17900 193 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 ITGALP20701 1170 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 LHCGRP22888 699 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 MMP12P39900 470 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 STK19P49842 368 aaPredicted RBP6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 HERVK_113P63132 956 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 DPTQ07507 201 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 SNCBQ16143 134 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 ZNF678Q5SXM1 525 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 C9orf64Q5T6V5 341 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 GPRC6AQ5T6X5 926 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 HENMT1Q5T8I9 393 aaKnown RBP6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 CHSY3Q70JA7 882 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 C12orf40Q86WS4 652 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 NXPE1Q8N323 547 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 GPATCH11Q8N954 259 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 TXNDC5Q8NBS9 432 aaKnown RBP6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 DDHD1Q8NEL9 900 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 PPP4R1Q8TF05 950 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 GDPD5Q8WTR4 605 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 RAB7BQ96AH8 199 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 PTERQ96BW5 349 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 COQ10AQ96MF6 247 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 NECTIN4Q96NY8 510 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 ERVK-6Q9BXR3 956 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 GPR63Q9BZJ6 419 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 BRD9Q9H8M2 597 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 PIDD1Q9HB75 910 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 NPHS2Q9NP85 383 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 STK38LQ9Y2H1 464 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 NUMBLQ9Y6R0 609 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 KIAA0100Q14667 2235 aaKnown RBP6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 TK2O00142 265 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 SLC16A5O15375 505 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 SPINT1O43278 529 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 PRNPP04156 253 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 CCDC166P0CW27 439 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 TPBGLP0DKB5 382 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 MPC1LP0DKB6 136 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 NNMTP40261 264 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 NSG1P42857 185 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 IDH3AP50213 366 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 RPL14P50914 215 aaKnown RBP6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 ATP4BP51164 291 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 PTPRCAPQ14761 206 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 PPP1R3AQ16821 1122 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 MTSS1LQ765P7 747 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 TDHQ8IZJ6 230 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 PDPRQ8NCN5 879 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 GIMAP7Q8NHV1 300 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 STAG3L4Q8TBR4 150 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 ACTRT2Q8TDY3 377 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 ZNF483Q8TF39 744 aaPredicted RBP6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 ILKAPQ9H0C8 392 aaPredicted RBP6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 MEAF6Q9HAF1 191 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 EML4Q9HC35 981 aaKnown RBP6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 PLK2Q9NYY3 685 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 NUDT4Q9NZJ9 180 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 PKD2L2Q9NZM6 624 aa6.78□□□□□ -1.32
CX3CR1-202ENST00000399220 TRANK1O15050 2925 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 SERTM1A2A2V5 107 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 WDR91A4D1P6 747 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 AREL1O15033 823 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 GRID2O43424 1007 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 ATP6V1G2O95670 118 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 ENO2P09104 434 aaPredicted RBP6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 ALPIP09923 528 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 MAPK9P45984 424 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 EPHB1P54762 984 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 RUNX3Q13761 415 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 HERC3Q15034 1050 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 PCBP2Q15366 365 aaKnown RBP eCLIP6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 APLFQ8IW19 511 aaPredicted RBP6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 TERB1Q8NA31 727 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 GPR26Q8NDV2 337 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 MSANTD3Q96H12 275 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 RIPOR3Q96MK2 946 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 CCT7Q99832 543 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 TM6SF2Q9BZW4 377 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 TNKS2Q9H2K2 1166 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 MMADHCQ9H3L0 296 aaPredicted RBP6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 RABEP2Q9H5N1 569 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 SLC28A3Q9HAS3 691 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 ZFP14Q9HCL3 533 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 SUN2Q9UH99 717 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 SLCO3A1Q9UIG8 710 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 DNAJC16Q9Y2G8 782 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 SLC30A1Q9Y6M5 507 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 CHD9Q3L8U1 2897 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 C1orf232A0A0U1RR37 186 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 KPNA5O15131 536 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 HDAC3O15379 428 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 MAGEC1O60732 1142 aa6.77□□□□□ -1.33
CX3CR1-202ENST00000399220 CLDN7O95471 211 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms