RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SPRP35270 261 aaPredicted RBP10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 PHC1P78364 1004 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 FAM189BP81408 668 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 TSPY1Q01534 308 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 POLD3Q15054 466 aaPredicted RBP10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 CCDC58Q4VC31 144 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 WDR45BQ5MNZ6 344 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 RTP2Q5QGT7 225 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 OR6B2Q6IFH4 312 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 C8orf82Q6P1X6 216 aaPredicted RBP10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 SPPL2CQ8IUH8 684 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 AQP12AQ8IXF9 295 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 SCML4Q8N228 414 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 SDR16C5Q8N3Y7 309 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 SUN5Q8TC36 379 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 MAGEE2Q8TD90 523 aaPredicted RBP10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 ARNTL2Q8WYA1 636 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 TP53INP1Q96A56 240 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 ZNF560Q96MR9 790 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 CLSTN3Q9BQT9 956 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 TRIM15Q9C019 465 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 SP140LQ9H930 580 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 GPATCH2LQ9NWQ4 482 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 TMEM161AQ9NX61 479 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 VWA7Q9Y334 891 aa10.09□□□□□ -0.79
HMGCLL1-205ENST00000398661 TRPC5OSA6NMA1 111 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 DYRK3O43781 588 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 SCO2O43819 266 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 C2P06681 752 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 APOA4P06727 396 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 SNRPB2P08579 225 aaKnown RBP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 PSMA4P25789 261 aaKnown RBP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 LIMK2P53671 638 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 COPZ1P61923 177 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 CHRNEQ04844 493 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 SQLEQ14534 574 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 AASDHQ4L235 1098 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 PAGE2BQ5JRK9 111 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 FAM102AQ5T9C2 384 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 FSTL4Q6MZW2 842 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 CES3Q6UWW8 571 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 TMC5Q6UXY8 1006 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 HFE2Q6ZVN8 426 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 FAM183BPQ6ZVS7 135 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 NT5DC4Q86YG4 428 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 CRIPAKQ8N1N5 446 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 TTC39CQ8N584 583 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 PCDH19Q8TAB3 1148 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 RDH11Q8TC12 318 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 URGCPQ8TCY9 931 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 HDAC10Q969S8 669 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 CERS2Q96G23 380 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 DNAI2Q9GZS0 605 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 LHX5Q9H2C1 402 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 FBXO8Q9NRD0 319 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 ABI2Q9NYB9 513 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 CCDC167Q9P0B6 97 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 CRNNQ9UBG3 495 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 PDCD11Q14690 1871 aaKnown RBP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 TMEM233B4DJY2 109 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 TK2O00142 265 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 PRPSAP2O60256 369 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 RFPL2O75678 378 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 TIMP1P01033 207 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 NTRK1P04629 796 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 F7P08709 466 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 CDH1P12830 882 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 HTR1BP28222 390 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 KRT6CP48668 564 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 ECT2LQ008S8 904 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 DSC1Q08554 894 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 ADIGQ0VDE8 80 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 SLC12A1Q13621 1099 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 DDR2Q16832 855 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 SLC39A12Q504Y0 691 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 OVOS1Q6IE37 1185 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 HACD2Q6Y1H2 254 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 STRA8Q7Z7C7 330 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 SPARTQ8N0X7 666 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 KDM1BQ8NB78 822 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 TTC16Q8NEE8 873 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 HTRA1Q92743 480 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 VPS33AQ96AX1 596 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 TOX2Q96NM4 488 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 MUS81Q96NY9 551 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 SLC39A3Q9BRY0 314 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 VN1R3Q9BXE9 311 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 EMILIN2Q9BXX0 1053 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 CRISPLD1Q9H336 500 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 CERS4Q9HA82 394 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 MARCH5Q9NX47 278 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 SYBUQ9NX95 663 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 QPCTLQ9NXS2 382 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 ITM2BQ9Y287 266 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 TESMINQ9Y4I5 508 aa10.08□□□□□ -0.8
HMGCLL1-205ENST00000398661 H0YAE9 185 aa10.07□□□□□ -0.8
HMGCLL1-205ENST00000398661 AREL1O15033 823 aa10.07□□□□□ -0.8
HMGCLL1-205ENST00000398661 IDH3BO43837 385 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms