RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 CYP8B1Q9UNU6 501 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 COQ6Q9Y2Z9 468 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 A0A1W2PQU0 124 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 IGLON5A6NGN9 336 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 HMGB1P1B2RPK0 211 aaPredicted RBP14.11□□□□□ -0.15
SKA1-202ENST00000398452 SEMA4FO95754 770 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 AKT1P31749 480 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 PTGER3P43115 390 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 POLD2P49005 469 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 LIMK2P53671 638 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 MPP1Q00013 466 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 MTAPQ13126 283 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 DNAJC3Q13217 504 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 FZD5Q13467 585 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 ITIH4Q14624 930 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 MAP7D1Q3KQU3 841 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 TECPR1Q7Z6L1 1165 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 SERPINA9Q86WD7 417 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 PHYKPLQ8IUZ5 450 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 GPATCH11Q8N954 259 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 DCAKDQ8WVC6 231 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 TSPAN17Q96FV3 270 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 SMC6Q96SB8 1091 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 COPS8Q99627 209 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 DHRS4Q9BTZ2 278 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 TSSK1BQ9BXA7 367 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 ZCCHC2Q9C0B9 1178 aaKnown RBP14.11□□□□□ -0.15
SKA1-202ENST00000398452 CLPBQ9H078 707 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 SLC17A6Q9P2U8 582 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 LGALS13Q9UHV8 139 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 COMMD10Q9Y6G5 202 aa14.11□□□□□ -0.15
SKA1-202ENST00000398452 CACNA1IQ9P0X4 2223 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 TRIM49D1C9J1S8 452 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 E5RI56 91 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 SPINT1O43278 529 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 UGT1A9O60656 530 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 AHSGP02765 367 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 ITGA2BP08514 1039 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 MSH3P20585 1137 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 SAT1P21673 171 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 ACRV1P26436 265 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 CD6P30203 668 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 SERPINB8P50452 374 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 TAS2R38P59533 333 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 GTF2H3Q13889 308 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 GAS6Q14393 721 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 LRRC14Q15048 493 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 TYSND1Q2T9J0 566 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 LDLRAP1Q5SW96 308 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 MROH9Q5TGP6 573 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 FAM45BPQ6NSW5 357 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 PSAPL1Q6NUJ1 521 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 RAPH1Q70E73 1250 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 LDB1Q86U70 411 aaPredicted RBP14.1□□□□□ -0.15
SKA1-202ENST00000398452 NLRP8Q86W28 1048 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 NXPE1Q8N323 547 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 FAM45AQ8TCE6 357 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 SCAMP4Q969E2 229 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 FAM131CQ96AQ9 280 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 ELMO2Q96JJ3 720 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 ATP6V1G3Q96LB4 118 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 SLC17A9Q9BYT1 436 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 TPSD1Q9BZJ3 242 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 IQCGQ9H095 443 aaKnown RBP14.1□□□□□ -0.15
SKA1-202ENST00000398452 UGT1A7Q9HAW7 530 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 UGT1A10Q9HAW8 530 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 UGT1A8Q9HAW9 530 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 ZDHHC3Q9NYG2 299 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 USP36Q9P275 1121 aaKnown RBP14.1□□□□□ -0.15
SKA1-202ENST00000398452 MARCH4Q9P2E8 410 aaPredicted RBP14.1□□□□□ -0.15
SKA1-202ENST00000398452 CTNNAL1Q9UBT7 734 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 GNPTGQ9UJJ9 305 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 TLK1Q9UKI8 766 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 NOVA2Q9UNW9 492 aaKnown RBP14.1□□□□□ -0.15
SKA1-202ENST00000398452 CRYL1Q9Y2S2 319 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 PCDHB1Q9Y5F3 818 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 PSAT1Q9Y617 370 aa14.1□□□□□ -0.15
SKA1-202ENST00000398452 FAM95CA0A1B0GW59 222 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 H3BMM5 538 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 AGPSO00116 658 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 QSOX1O00391 747 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 PRMT5O14744 637 aaPredicted RBP14.09□□□□□ -0.15
SKA1-202ENST00000398452 AXIN1O15169 862 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 LAMTOR5O43504 91 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 FAM155BO75949 473 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 HAUS5O94927 633 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 SLC25A14O95258 325 aaPredicted RBP14.09□□□□□ -0.15
SKA1-202ENST00000398452 C1QAP02745 245 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 PCCBP05166 539 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 UGT1A6P19224 532 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 UGT1A1P22309 533 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 UGT1A4P22310 534 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 TYK2P29597 1187 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 UGT1A3P35503 534 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 UGT1A5P35504 534 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 NUDT1P36639 197 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 NSG1P42857 185 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 CREB5Q02930 508 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 DPTQ07507 201 aa14.09□□□□□ -0.15
SKA1-202ENST00000398452 USP10Q14694 798 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms