RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CCR3P51677 355 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 ELP6Q0PNE2 266 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 SEPT6Q14141 434 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.83□□□□□ -0.04
CAPN3-207ENST00000397200 MTDHQ86UE4 582 aaKnown RBP14.83□□□□□ -0.04
CAPN3-207ENST00000397200 KBTBD6Q86V97 674 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 CRLF3Q8IUI8 442 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 ACVR1CQ8NER5 493 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 BRSK1Q8TDC3 778 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 PBXIP1Q96AQ6 731 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 TMEM237Q96Q45 408 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 B4GALT6Q9UBX8 382 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 SPO11Q9Y5K1 396 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 MROH6A6NGR9 719 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 NPIPB15A6NHN6 443 aaPredicted RBP14.82□□□□□ -0.04
CAPN3-207ENST00000397200 VAPBO95292 243 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 AHSGP02765 367 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 APOA4P06727 396 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 MYL2P10916 166 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 COL6A2P12110 1019 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 VIPR1P32241 457 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 KCNJ2P63252 427 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 ACVR1Q04771 509 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 RIPK1Q13546 671 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 LAMB3Q13751 1172 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 KRT72Q14CN4 511 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 PTPRRQ15256 657 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 TAF1BQ53T94 588 aaPredicted RBP14.82□□□□□ -0.04
CAPN3-207ENST00000397200 TSTD2Q5T7W7 516 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 PIP5KL1Q5T9C9 394 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 AGBL4Q5VU57 503 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 USP30Q70CQ3 517 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 DPPA4Q7L190 304 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 GLT6D1Q7Z4J2 308 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 CCDC91Q7Z6B0 441 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 CAMKK1Q8N5S9 505 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 MDGA1Q8NFP4 955 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 RDH11Q8TC12 318 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 PEX13Q92968 403 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 SLC7A6OSQ96CW6 309 aaPredicted RBP14.82□□□□□ -0.04
CAPN3-207ENST00000397200 ATXN7L3BQ96GX2 97 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 LYSMD1Q96S90 227 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 GPR63Q9BZJ6 419 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 STN1Q9H668 368 aaKnown RBP14.82□□□□□ -0.04
CAPN3-207ENST00000397200 CAB39LQ9H9S4 337 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 SPATA6Q9NWH7 488 aaPredicted RBP14.82□□□□□ -0.04
CAPN3-207ENST00000397200 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.82□□□□□ -0.04
CAPN3-207ENST00000397200 HEY2Q9UBP5 337 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 SERGEFQ9UGK8 458 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 SLC2A6Q9UGQ3 507 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 MID2Q9UJV3 735 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 FZD4Q9ULV1 537 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 ZNF711Q9Y462 761 aa14.82□□□□□ -0.04
CAPN3-207ENST00000397200 TTC28Q96AY4 2481 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 C1orf232A0A0U1RR37 186 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 A8MX80 341 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 G3V2L1 256 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 GOLGA8TH3BQL2 631 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 NEMP1O14524 444 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 CRTAMO95727 393 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 SLC4A1P02730 911 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ALOX15P16050 662 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-207ENST00000397200 MMP12P39900 470 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 SLC1A2P43004 574 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 IRF9Q00978 393 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 SEMG2Q02383 582 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ARHGEF7Q14155 803 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 CNGA3Q16281 694 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 CRTC1Q6UUV9 634 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 MAMSTRQ6ZN01 415 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ZCCHC23Q6ZST2 131 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 TBC1D1Q86TI0 1168 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-207ENST00000397200 C10orf107Q8IVU9 208 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 SORT1Q99523 831 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 WWP1Q9H0M0 922 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ZNF395Q9H8N7 513 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ZFYVE1Q9HBF4 777 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ZNF358Q9NW07 568 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 C2orf81A6NN90 581 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 HGSO14964 777 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-207ENST00000397200 AREL1O15033 823 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 SLC7A4O43246 635 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 H2AFYO75367 372 aaKnown RBP14.81□□□□□ -0.04
CAPN3-207ENST00000397200 HAUS5O94927 633 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 F7P08709 466 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-207ENST00000397200 KRT16P08779 473 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 SLC35E2BP0CK96 405 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 CPA3P15088 417 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ZNF30P17039 623 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 KCNA4P22459 653 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 SERPINB3P29508 390 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 GMPRP36959 345 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 ABCG1P45844 678 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 CD151P48509 253 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 SLC1A6P48664 564 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 TPMTP51580 245 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 IRX4P78413 519 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 MPP1Q00013 466 aa14.81□□□□□ -0.04
CAPN3-207ENST00000397200 TAF1AQ15573 450 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-207ENST00000397200 LRRC66Q68CR7 880 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms