RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 CXCR3P49682 368 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 PPP1R15BQ5SWA1 713 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 CYP2W1Q8TAV3 490 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 TAMM41Q96BW9 452 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 ZNF639Q9UID6 485 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 TRPV2Q9Y5S1 764 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 A8MUI8 341 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 PQBP1O60828 265 aaKnown RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 DBIP07108 87 aaKnown RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 PTX3P26022 381 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 PCDH1Q08174 1060 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 C9orf64Q5T6V5 341 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 UBE2R2Q712K3 238 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 RGL4Q8IZJ4 473 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 EZH1Q92800 747 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 TCF25Q9BQ70 676 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 TM6SF2Q9BZW4 377 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 MRPL17Q9NRX2 175 aaKnown RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 A0A0G2JPF8 293 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 DPPA5A6NC42 116 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 HNRNPCL3B7ZW38 293 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 IL1BP01584 269 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 GPIP06744 558 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 HNRNPCL4P0DMR1 293 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 GRSF1Q12849 480 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 RALGPS2Q86X27 583 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 RTFDC1Q9BY42 306 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 RAB23Q9ULC3 237 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 MYH1P12882 1939 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 MYH2Q9UKX2 1941 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 MYH4Q9Y623 1939 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 RPS9P46781 194 aaKnown RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 LAPTM4BQ86VI4 370 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 TMEM27Q9HBJ8 222 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 ASF1AQ9Y294 204 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 TMEM150BA6NC51 233 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 SLC25A14O95258 325 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 UROSP10746 265 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 OCLNQ16625 522 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 QPCTQ16769 361 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 LIN52Q52LA3 116 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 WSCD1Q658N2 575 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 TCEAL6Q6IPX3 200 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 ADNP2Q6IQ32 1131 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 TMPRSS11BQ86T26 416 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 DNASE1L2Q92874 299 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 CEP295NLQ96MC4 621 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 SLC17A7Q9P2U7 560 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 GNB5O14775 395 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 KIR3DL1P43629 444 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 CCNYL2Q5T2Q4 361 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 PHF13Q86YI8 300 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 PRMT6Q96LA8 375 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 CHMP1AQ9HD42 196 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-202ENST00000396578 USP31Q70CQ4 1352 aa13.9□□□□□ -0.18
COL4A3-202ENST00000396578 HCN1O60741 890 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 SSR2P43308 183 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 RORCP51449 518 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 OAZ1P54368 228 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 CREMQ03060 361 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PPP3CAQ08209 521 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 TTC29Q8NA56 475 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 KCNS3Q9BQ31 491 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PAK6Q9NQU5 681 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PAPSS1O43252 624 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 KLRK1P26718 216 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 NRG1Q02297 640 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 USF2Q15853 346 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 REP15Q6BDI9 236 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 CNTD1Q8N815 330 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 RBM15BQ8NDT2 890 aaKnown RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 ING5Q8WYH8 240 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 UFD1Q92890 307 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 FBXO5Q9UKT4 447 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 A0A075B6Q4 140 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 TIE1P35590 1138 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 GNPDA1P46926 289 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 ADAMTS15Q8TE58 950 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 RAB2BQ8WUD1 216 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 SMURF2Q9HAU4 748 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 ERBB2P04626 1255 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 RPLP0P05388 317 aaKnown RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 ELFN1P0C7U0 828 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 FSHRP23945 695 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 ATXN1P54253 815 aaKnown RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 KCTD8Q6ZWB6 473 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 C12orf66Q96MD2 445 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 AIF1LQ9BQI0 150 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 ANXA2P2A6NMY6 339 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 IPO13O94829 963 aaKnown RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 ANXA2P07355 339 aaKnown RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 MPSTP25325 297 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PDX1P52945 283 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 TXNL4AP83876 142 aaKnown RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 DEFA5Q01523 94 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 TUBB3Q13509 450 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 DLG2Q15700 870 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 SATL1Q86VE3 508 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms