RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 LRRC8EQ6NSJ5 796 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 ATG14Q6ZNE5 492 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 Q6ZVL8 140 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 TAS2R42Q7RTR8 314 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 CHPFQ8IZ52 775 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 FSTL5Q8N475 847 aaPredicted RBP12.61□□□□□ -0.39
TRIM39-204ENST00000396548 KCNJ9Q92806 393 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 MSANTD3Q96H12 275 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 CDH19Q9H159 772 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 MANSC1Q9H8J5 431 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 CD84Q9UIB8 345 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 FNDC3AQ9Y2H6 1198 aaKnown RBP12.61□□□□□ -0.39
TRIM39-204ENST00000396548 FADS3Q9Y5Q0 445 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 FADS2P1A8MWK0 482 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 C1QTNF3-AMACRE9PGA6 284 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 SNNO75324 88 aaPredicted RBP12.61□□□□□ -0.39
TRIM39-204ENST00000396548 NFKBIAP25963 317 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 PSMD8P48556 350 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 TECRLQ5HYJ1 363 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 MACC1Q6ZN28 852 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 SPATA6LQ8N4H0 392 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 TRAM1L1Q8N609 369 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 RDH11Q8TC12 318 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 CD200R1Q8TD46 325 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 BCAS4Q8TDM0 211 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 RAB7BQ96AH8 199 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 ABCG8Q9H221 673 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 GPAMQ9HCL2 828 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 LATS2Q9NRM7 1088 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 RAD18Q9NS91 495 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 PCDHB1Q9Y5F3 818 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 TRIOO75962 3097 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 WDR91A4D1P6 747 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 AP1G1O43747 822 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 EDF1O60869 148 aaKnown RBP12.61□□□□□ -0.39
TRIM39-204ENST00000396548 LTA4HP09960 611 aaKnown RBP12.61□□□□□ -0.39
TRIM39-204ENST00000396548 SRFP11831 508 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 CD1DP15813 335 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 BGNP21810 368 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 ELP6Q0PNE2 266 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 ITIH4Q14624 930 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 CST6Q15828 149 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 TSNAXIP1Q2TAA8 658 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 PAF1Q8N7H5 531 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 OR2T3Q8NH03 318 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 SCAMP4Q969E2 229 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 DTD2Q96FN9 168 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 VPS35Q96QK1 796 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 FAM83DQ9H4H8 585 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 RABEP2Q9H5N1 569 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 SLCO1B3Q9NPD5 702 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 ZDHHC3Q9NYG2 299 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 UBA6A0AVT1 1052 aaPredicted RBP12.6□□□□□ -0.39
TRIM39-204ENST00000396548 PRMT5O14744 637 aaPredicted RBP12.6□□□□□ -0.39
TRIM39-204ENST00000396548 NIPSNAP2O75323 286 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 ADH1BP00325 375 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 CCDC166P0CW27 439 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 ACAP2Q15057 778 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 SEPT7Q16181 437 aaKnown RBP12.6□□□□□ -0.39
TRIM39-204ENST00000396548 FAM46CQ5VWP2 391 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 PTCRAQ6ISU1 281 aaPredicted RBP12.6□□□□□ -0.39
TRIM39-204ENST00000396548 FBXL19Q6PCT2 694 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 ZYG11AQ6WRX3 759 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 ZNF765Q7L2R6 523 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 ISCA2Q86U28 154 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 TAX1BP1Q86VP1 789 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 C10orf107Q8IVU9 208 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 RBFAQ8N0V3 343 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 ULK4Q96C45 1275 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 C20orf27Q9GZN8 174 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 FGFR1OP2Q9NVK5 253 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 SERGEFQ9UGK8 458 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 MBD1Q9UIS9 605 aaPredicted RBP12.6□□□□□ -0.39
TRIM39-204ENST00000396548 PRDM4Q9UKN5 801 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 H3BMM5 538 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 PFDN6O15212 129 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 MID1O15344 667 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 SGTAO43765 313 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 APOA4P06727 396 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 ELFN1P0C7U0 828 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 C5AR1P21730 350 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 KCNC1P48547 511 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 SLC12A2P55011 1212 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 MRPS21P82921 87 aaKnown RBP12.6□□□□□ -0.39
TRIM39-204ENST00000396548 ITGA9Q13797 1035 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 NLRP8Q86W28 1048 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 PELI3Q8N2H9 469 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 LKAAEAR1Q8TD35 194 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 MKRN2Q9H000 416 aaKnown RBP12.6□□□□□ -0.39
TRIM39-204ENST00000396548 TAS2R13Q9NYV9 303 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 IKZF3Q9UKT9 509 aa12.6□□□□□ -0.39
TRIM39-204ENST00000396548 CNOT6Q9ULM6 557 aaKnown RBP12.6□□□□□ -0.39
TRIM39-204ENST00000396548 TK2O00142 265 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 CPA3P15088 417 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 IL9P15248 144 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 ZNF7P17097 686 aaPredicted RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 ARRB2P32121 409 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 GRSF1Q12849 480 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 TDGQ13569 410 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms