RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 FAM151BQ6UXP7 276 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 ADAMTSL2Q86TH1 951 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 C19orf60Q96EN9 201 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 PANX3Q96QZ0 392 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 BBS2Q9BXC9 721 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 TNKS2Q9H2K2 1166 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 TDP1Q9NUW8 608 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 NVLO15381 856 aaKnown RBP16.02■□□□□ 0.16
SNX6-202ENST00000396526 MAP3K7O43318 606 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 ECI2O75521 394 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 POP4O95707 220 aaKnown RBP16.02■□□□□ 0.16
SNX6-202ENST00000396526 GCKP35557 465 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 POLR2LP62875 67 aaKnown RBP16.02■□□□□ 0.16
SNX6-202ENST00000396526 TIAL1Q01085 375 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNX6-202ENST00000396526 FASTKQ14296 549 aaKnown RBP16.02■□□□□ 0.16
SNX6-202ENST00000396526 DMC1Q14565 340 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 SERPINA9Q86WD7 417 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 HOMEZQ8IX15 550 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 DDIASQ8IXT1 998 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 DSELQ8IZU8 1212 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 PCDH20Q8N6Y1 951 aaKnown RBP16.02■□□□□ 0.16
SNX6-202ENST00000396526 SIDT2Q8NBJ9 832 aaKnown RBP16.02■□□□□ 0.16
SNX6-202ENST00000396526 TRPC4APQ8TEL6 797 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 VCX3BQ9H321 246 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 DHRS7Q9Y394 339 aa16.02■□□□□ 0.16
SNX6-202ENST00000396526 TNPO3Q9Y5L0 923 aaKnown RBP16.02■□□□□ 0.16
SNX6-202ENST00000396526 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 GLYATL1P3A0A0U1RQE8 302 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 CFLARO15519 480 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 OR1I1O60431 355 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 ENO3P13929 434 aaPredicted RBP16.02■□□□□ 0.15
SNX6-202ENST00000396526 TSPAN8P19075 237 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 SPAM1P38567 509 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 MYLK3Q32MK0 819 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 TTLL9Q3SXZ7 439 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 PGAM4Q8N0Y7 254 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 CBARPQ8N350 705 aaPredicted RBP16.02■□□□□ 0.15
SNX6-202ENST00000396526 OR56A4Q8NGH8 313 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 SLC26A7Q8TE54 656 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 RCN3Q96D15 328 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 RPL10LQ96L21 214 aaKnown RBP16.02■□□□□ 0.15
SNX6-202ENST00000396526 TLR9Q9NR96 1032 aa16.02■□□□□ 0.15
SNX6-202ENST00000396526 CAPN8A6NHC0 703 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 SLC9A3R1O14745 358 aaPredicted RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 SIX3O95343 332 aaPredicted RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 JUNP05412 331 aaKnown RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 MTHFD2P13995 350 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 IRX1P78414 480 aaPredicted RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 XIAPP98170 497 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 UBE3AQ05086 875 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 ZDHHC20Q5W0Z9 365 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 PGM2L1Q6PCE3 622 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 DNAJC9Q8WXX5 260 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 SLC25A23Q9BV35 468 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 SUV39H2Q9H5I1 410 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 NPEPPSL1A6NEC2 478 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 CDK14O94921 469 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 DGKAP23743 735 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 ARL1P40616 181 aaPredicted RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 ERVFC1P60507 584 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 KIF19Q2TAC6 998 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 AGKQ53H12 422 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 CLEC6AQ6EIG7 209 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 LRRC74BQ6ZQY2 392 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 RPS27LQ71UM5 84 aaKnown RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 CPNE9Q8IYJ1 553 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 MYO1HQ8N1T3 1032 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 POF1BQ8WVV4 589 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 CEP44Q9C0F1 390 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 HS3ST2Q9Y278 367 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 COL4A6Q14031 1691 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 CDC7O00311 574 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 TBX10O75333 385 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 PDE5AO76074 875 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 STAMBPO95630 424 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 SRCP12931 536 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 RPS3P23396 243 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNX6-202ENST00000396526 HNF1BP35680 557 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 TPRG1Q6ZUI0 275 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 CHSY3Q70JA7 882 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 MYLK4Q86YV6 388 aaPredicted RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 SHKBP1Q8TBC3 707 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 CD200R1Q8TD46 325 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 FUBP1Q96AE4 644 aaKnown RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 PDLIM5Q96HC4 596 aaKnown RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 MARK4Q96L34 752 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 ZNF385DQ9H6B1 395 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 UTP6Q9NYH9 597 aaKnown RBP16.01■□□□□ 0.15
SNX6-202ENST00000396526 NUDT4Q9NZJ9 180 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 LRRC42Q9Y546 428 aa16.01■□□□□ 0.15
SNX6-202ENST00000396526 LTBP2Q14767 1821 aa16■□□□□ 0.15
SNX6-202ENST00000396526 ZNF197O14709 1029 aa16■□□□□ 0.15
SNX6-202ENST00000396526 HSPA1AP0DMV8 641 aaKnown RBP16■□□□□ 0.15
SNX6-202ENST00000396526 HSPA1BP0DMV9 641 aaKnown RBP16■□□□□ 0.15
SNX6-202ENST00000396526 ATP4BP51164 291 aa16■□□□□ 0.15
SNX6-202ENST00000396526 MTTPP55157 894 aa16■□□□□ 0.15
SNX6-202ENST00000396526 CDC16Q13042 620 aa16■□□□□ 0.15
SNX6-202ENST00000396526 C22orf39Q6P5X5 142 aa16■□□□□ 0.15
SNX6-202ENST00000396526 PHOSPHO2Q8TCD6 241 aa16■□□□□ 0.15
SNX6-202ENST00000396526 EEF1AKMT1Q8WVE0 214 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms