RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ACTR2P61160 394 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 CRADDP78560 199 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 GAD2Q05329 585 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 FASTKQ14296 549 aaKnown RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 OXA1LQ15070 435 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 UGP2Q16851 508 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 RUNDC3AQ59EK9 446 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 FAM209BQ5JX69 171 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 DGKKQ5KSL6 1271 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 C6orf132Q5T0Z8 1188 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 CYB5R2Q6BCY4 276 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 TMEM270Q6UE05 265 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 LYSMD3Q7Z3D4 306 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 GALNT5Q7Z7M9 940 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 ZDHHC13Q8IUH4 622 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 MOCOSQ96EN8 888 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 CRELD1Q96HD1 420 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 RADILQ96JH8 1075 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 FYTTD1Q96QD9 318 aaKnown RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 GAS2L1Q99501 681 aaPredicted RBP8.38□□□□□ -1.07
NDE1-202ENST00000396355 MROQ9BYG7 248 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 PXMP2Q9NR77 195 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 SLC39A10Q9ULF5 831 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 RIMKLBQ9ULI2 386 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 SIP14410 1827 aa8.38□□□□□ -1.07
NDE1-202ENST00000396355 XPNPEP2O43895 674 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 GMDSO60547 372 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 BCAS1O75363 584 aaPredicted RBP8.37□□□□□ -1.07
NDE1-202ENST00000396355 PIGNO95427 931 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 FTH1P02794 183 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 NNMTP40261 264 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 HAAOP46952 286 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 SLC26A2P50443 739 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CYP24A1Q07973 514 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 DPYSQ14117 519 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 SPCS2Q15005 226 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 MAPRE2Q15555 327 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 BRDTQ58F21 947 aaPredicted RBP8.37□□□□□ -1.07
NDE1-202ENST00000396355 ZC3H12BQ5HYM0 836 aaKnown RBP8.37□□□□□ -1.07
NDE1-202ENST00000396355 TPRG1LQ5T0D9 272 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CCNYL2Q5T2Q4 361 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 SCARA5Q6ZMJ2 495 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CIR1Q86X95 450 aaPredicted RBP8.37□□□□□ -1.07
NDE1-202ENST00000396355 LRRC17Q8N6Y2 441 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 C7orf31Q8N865 590 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 DNAJB8Q8NHS0 232 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 MFSD14AQ96MC6 490 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 FAM213AQ9BRX8 229 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 HAPLN2Q9GZV7 340 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 LRRC19Q9H756 370 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CAB39LQ9H9S4 337 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 TMEM39AQ9NV64 488 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 SMOXQ9NWM0 555 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 SMPD3Q9NY59 655 aaPredicted RBP8.37□□□□□ -1.07
NDE1-202ENST00000396355 NKIRAS2Q9NYR9 191 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CLCA3PQ9Y6N3 262 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 SF3B1O75533 1304 aaKnown RBP eCLIP8.37□□□□□ -1.074e-9■■■■■ 126.2
NDE1-202ENST00000396355 SMIM30A4D0T7 59 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 SMLR1H3BR10 107 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 SYN3O14994 580 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 NARSO43776 548 aaKnown RBP8.37□□□□□ -1.07
NDE1-202ENST00000396355 NOBOXO60393 691 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 PPM1BO75688 479 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 TGDSO95455 350 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 TSPAN19P0C672 248 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 ZNF3P17036 446 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 F8A1P23610 371 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 L1CAMP32004 1257 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 RPS9P46781 194 aaKnown RBP8.37□□□□□ -1.07
NDE1-202ENST00000396355 PLK1P53350 603 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 PSMC5P62195 406 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CHRNB3Q05901 458 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 ABRQ12979 859 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 COL19A1Q14993 1142 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CLEC16AQ2KHT3 1053 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 SPDYE7PQ495Y7 208 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 AFTPHQ6ULP2 937 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 FAM131AQ6UXB0 335 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 MFSD7Q6UXD7 560 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 IDO2Q6ZQW0 420 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CHSY3Q70JA7 882 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 GPR142Q7Z601 462 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 GLIS1Q8NBF1 620 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 FBXO30Q8TB52 745 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 PDCD10Q9BUL8 212 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 BTBD2Q9BX70 525 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 LHPPQ9H008 270 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CYP3A43Q9HB55 503 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 EIF3KQ9UBQ5 218 aaKnown RBP8.37□□□□□ -1.07
NDE1-202ENST00000396355 GMEB2Q9UKD1 530 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 MGAT4BQ9UQ53 548 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 NUMBLQ9Y6R0 609 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 MAU2Q9Y6X3 613 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 ADGRA2Q96PE1 1338 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 MGAMO43451 1857 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 TCRBV9S1A1TA0A576 114 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 CIB4A0PJX0 185 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 EFCAB9A8MZ26 197 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 MAGEB2O15479 319 aa8.37□□□□□ -1.07
NDE1-202ENST00000396355 MSCO60682 206 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms