RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 PLIN3O60664 434 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 IFNGP01579 166 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 LIN54Q6MZP7 749 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 FITM2Q8N6M3 262 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 CCDC185Q8N715 623 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 ZNF248Q8NDW4 579 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 CLHC1Q8NHS4 586 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 NDRG1Q92597 394 aaKnown RBP17.26■□□□□ 0.35
UBFD1-201ENST00000395878 PPM1MQ96MI6 270 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 RBM4BQ9BQ04 359 aaKnown RBP17.26■□□□□ 0.35
UBFD1-201ENST00000395878 RBM4Q9BWF3 364 aaKnown RBP17.26■□□□□ 0.35
UBFD1-201ENST00000395878 RAB23Q9ULC3 237 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 C2CD4BA6NLJ0 364 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 CLDN9O95484 217 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 MSX2P35548 267 aaPredicted RBP17.26■□□□□ 0.35
UBFD1-201ENST00000395878 TOMM20Q15388 145 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 H3BM21 787 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 MTHFRP42898 656 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 CCR3P51677 355 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 NRG1Q02297 640 aaPredicted RBP17.26■□□□□ 0.35
UBFD1-201ENST00000395878 FAM92BQ6ZTR7 304 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 TBATAQ96M53 351 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 DMAC2Q9NW81 257 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 COMMD9Q9P000 198 aa17.26■□□□□ 0.35
UBFD1-201ENST00000395878 C2orf71A6NGG8 1288 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CBFA2T3O75081 653 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 NADKO95544 446 aaPredicted RBP17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CD48P09326 243 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 OR4Q2P0C623 313 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 PBX3P40426 434 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CTSKP43235 329 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CDH4P55283 916 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 MPP1Q00013 466 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 DSC2Q02487 901 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CLCQ05315 142 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 RALGDSQ12967 914 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 LPGAT1Q92604 370 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 EIF2B3Q9NR50 452 aaKnown RBP17.25■□□□□ 0.35
UBFD1-201ENST00000395878 AASDHPPTQ9NRN7 309 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CAPN8A6NHC0 703 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 UGT1A5P35504 534 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 MFSD3Q96ES6 412 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 SNX27Q96L92 541 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 ACAT2Q9BWD1 397 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CHID1Q9BWS9 393 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 UNC93B1Q9H1C4 597 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 MAGEH1Q9H213 219 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 IPPKQ9H8X2 491 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.25■□□□□ 0.35
UBFD1-201ENST00000395878 MIOSQ9NXC5 875 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 PADI3Q9ULW8 664 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 UROSP10746 265 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CCT3P49368 545 aaKnown RBP17.25■□□□□ 0.35
UBFD1-201ENST00000395878 NDST2P52849 883 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 ELP6Q0PNE2 266 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 THAP5Q7Z6K1 395 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 BORCS5Q969J3 196 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 MCMBPQ9BTE3 642 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 PHPT1Q9NRX4 125 aaPredicted RBP17.25■□□□□ 0.35
UBFD1-201ENST00000395878 IFT80Q9P2H3 777 aaPredicted RBP17.25■□□□□ 0.35
UBFD1-201ENST00000395878 PCDHGB3Q9Y5G1 929 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 ELOVL7A1L3X0 281 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 KCNU1A8MYU2 1149 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 H3BNH8 94 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 PER2O15055 1255 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 SSNA1O43805 119 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CHRNB2P17787 502 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 NELFEP18615 380 aaKnown RBP17.25■□□□□ 0.35
UBFD1-201ENST00000395878 DMPKQ09013 629 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 NOGQ13253 232 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 TMPRSS11BQ86T26 416 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 CIB1Q99828 191 aa17.25■□□□□ 0.35
UBFD1-201ENST00000395878 EVLQ9UI08 416 aaPredicted RBP17.25■□□□□ 0.35
UBFD1-201ENST00000395878 PLIN4Q96Q06 1357 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 FKTNO75072 461 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 DNTTP04053 509 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 PRKAR1AP10644 381 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 GNA12Q03113 381 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 TSTD2Q5T7W7 516 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 ANKS1BQ7Z6G8 1248 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 PIK3C3Q8NEB9 887 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 IMP3Q9NV31 184 aaKnown RBP17.24■□□□□ 0.35
UBFD1-201ENST00000395878 MBD2Q9UBB5 411 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 MRC1P22897 1456 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 TREHO43280 583 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 UGT2B4P06133 528 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 ALOX5P09917 674 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 SELPP16109 830 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 FLT3LGP49771 235 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 NOL9Q5SY16 702 aaKnown RBP17.24■□□□□ 0.35
UBFD1-201ENST00000395878 CAPSLQ8WWF8 208 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 ETAA1Q9NY74 926 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 FETUBQ9UGM5 382 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 TIMM22Q9Y584 194 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 ACLYP53396 1101 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 VPS26BQ4G0F5 336 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 CCNYL2Q5T2Q4 361 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 IL23RQ5VWK5 629 aa17.24■□□□□ 0.35
UBFD1-201ENST00000395878 SLC25A24Q6NUK1 477 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms