RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MRGPRX1Q96LB2 322 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 MLXIPLQ9NP71 852 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 NCKAP1Q9Y2A7 1128 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 ANKRD6Q9Y2G4 727 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 MTF2Q9Y483 593 aaPredicted RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 PRMT5O14744 637 aaPredicted RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 PKMP14618 531 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 CSRP3P50461 194 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 PGGT1BP53609 377 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 ADARP55265 1226 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 CDKN2DP55273 166 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 SFSWAPQ12872 951 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 LRRC14Q15048 493 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 KIAA1324Q6UXG2 1013 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 CDHR3Q6ZTQ4 885 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 BIRC8Q96P09 236 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 CLPBQ9H078 707 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 POLMQ9NP87 494 aaPredicted RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 ZDHHC3Q9NYG2 299 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 ACOT9Q9Y305 439 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 TOP3BO95985 862 aaKnown RBP20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 ESR1P03372 595 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 SLC35E2BP0CK96 405 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 NDUFV2P19404 249 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 FDXRP22570 491 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 GMPRP36959 345 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 CREB5Q02930 508 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 ITIH4Q14624 930 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 SETMARQ53H47 684 aaPredicted RBP20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 TTC19Q6DKK2 380 aaPredicted RBP20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 KBTBD6Q86V97 674 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 OR14C36Q8NHC7 312 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 DENND1AQ8TEH3 1009 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 DYDC1Q8WWB3 177 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 FAM131CQ96AQ9 280 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 NELL2Q99435 816 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 BOCQ9BWV1 1114 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 CAPS2Q9BXY5 557 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 P2RY12Q9H244 342 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 C12orf65Q9H3J6 166 aaKnown RBP20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 SMOXQ9NWM0 555 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 SLC17A7Q9P2U7 560 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 GRID1Q9ULK0 1009 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 PCDHB1Q9Y5F3 818 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 COMMD10Q9Y6G5 202 aa20.25■□□□□ 0.83
VCPKMT-202ENST00000395860 TRPM6Q9BX84 2022 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 A0A087X1B8 175 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 FAM170BA6NMN3 283 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 CHURC1-FNTBB4DL54 471 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 PLRG1O43660 514 aaKnown RBP20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 TM7SF2O76062 418 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 RHOBTB1O94844 696 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 RPS3P23396 243 aaKnown RBP eCLIP20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 IRF9Q00978 393 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 CTSL3PQ5NE16 218 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 LVRNQ6Q4G3 990 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 USP30Q70CQ3 517 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 ZNF765Q7L2R6 523 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 GDAP1Q8TB36 358 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 TSNARE1Q96NA8 513 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 FAM111AQ96PZ2 611 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 COPS8Q99627 209 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 PAIP2Q9BPZ3 127 aaKnown RBP20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 FOXQ1Q9C009 403 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 GPAMQ9HCL2 828 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 FZD4Q9ULV1 537 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 PLLPQ9Y342 182 aa20.24■□□□□ 0.83
VCPKMT-202ENST00000395860 FADS2P1A8MWK0 482 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 ATG13O75143 517 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 GSTA1P08263 222 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 C7P10643 843 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 GABRG2P18507 467 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 INSCQ1MX18 579 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 HHATQ5VTY9 493 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 SYT13Q7L8C5 426 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 CLEC14AQ86T13 490 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 TAX1BP1Q86VP1 789 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 HMGB4Q8WW32 186 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 ATXN2LQ8WWM7 1075 aaKnown RBP20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 TAS2R13Q9NYV9 303 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 GNPTGQ9UJJ9 305 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 TMPRSS11EQ9UL52 423 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 IGLON5A6NGN9 336 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 E5RI56 91 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 VPS26AO75436 327 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 NSG1P42857 185 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 DGKEP52429 567 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 ADPRHP54922 357 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 WDR4P57081 412 aaKnown RBP20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 PDAP1Q13442 181 aaKnown RBP20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 FZD5Q13467 585 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 GPRC6AQ5T6X5 926 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 PTRHD1Q6GMV3 140 aaKnown RBP20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 TBC1D1Q86TI0 1168 aaPredicted RBP20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 PIM3Q86V86 326 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 PLD6Q8N2A8 252 aaKnown RBP20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 CENPTQ96BT3 561 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 FAM136AQ96C01 138 aa20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 CCDC97Q96F63 343 aaPredicted RBP20.23■□□□□ 0.83
VCPKMT-202ENST00000395860 VPS35Q96QK1 796 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms