RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 HSPA14Q0VDF9 509 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 DLG1Q12959 904 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 CMPK2Q5EBM0 449 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 LCN1P1Q5VSP4 162 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 TMPRSS11AQ6ZMR5 421 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 FRMD7Q6ZUT3 714 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 RBFAQ8N0V3 343 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 FSTL5Q8N475 847 aaPredicted RBP17.12■□□□□ 0.33
SIN3A-203ENST00000394949 LRTM1Q9HBL6 345 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 CNOT6Q9ULM6 557 aaKnown RBP17.12■□□□□ 0.33
SIN3A-203ENST00000394949 MAGP20916 626 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 PTX3P26022 381 aaPredicted RBP17.11■□□□□ 0.33
SIN3A-203ENST00000394949 HNF4AP41235 474 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 CRYBB1P53674 252 aaPredicted RBP17.11■□□□□ 0.33
SIN3A-203ENST00000394949 EVX2Q03828 476 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 CPSF6Q16630 551 aaKnown RBP eCLIP17.11■□□□□ 0.33
SIN3A-203ENST00000394949 EEF1DP3Q658K8 133 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 AHSA2Q719I0 299 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 GALNT5Q7Z7M9 940 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 FNDC11Q9BVV2 318 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 PIGUQ9H490 435 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 TCAF1Q9Y4C2 921 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 CD48P09326 243 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 THOP1P52888 689 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 GDF10P55107 478 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 EML3Q32P44 896 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 CRY2Q49AN0 593 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 NEK5Q6P3R8 708 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 USP43Q70EL4 1123 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 DIRAS2Q96HU8 199 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.11■□□□□ 0.33
SIN3A-203ENST00000394949 MRPL17Q9NRX2 175 aaKnown RBP17.11■□□□□ 0.33
SIN3A-203ENST00000394949 IGSF9Q9P2J2 1179 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 PSME2Q9UL46 239 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 KIR3DL1P43629 444 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 MAPKAPK2P49137 400 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 CLCQ05315 142 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 MOGQ16653 247 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 CYP20A1Q6UW02 462 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 DNMT3LQ9UJW3 386 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 ST3GAL5Q9UNP4 418 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 ECDO95905 644 aaPredicted RBP17.11■□□□□ 0.33
SIN3A-203ENST00000394949 RPLP0P05388 317 aaKnown RBP17.11■□□□□ 0.33
SIN3A-203ENST00000394949 ACOX1Q15067 660 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 NOMO2Q5JPE7 1267 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 RAP1GAP2Q684P5 730 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 CNSTQ6PJW8 725 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 FAM156AQ8NDB6 213 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 DNAJB8Q8NHS0 232 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 MFSD3Q96ES6 412 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 C1GALT1C1Q96EU7 318 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 FAIM2Q9BWQ8 316 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 FZD1Q9UP38 647 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 HES2Q9Y543 173 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 PCDHGA10Q9Y5H3 936 aa17.11■□□□□ 0.33
SIN3A-203ENST00000394949 C2CD4BA6NLJ0 364 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 H3BSA7 217 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 CCNCP24863 283 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 STARP49675 285 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 CCDC157Q569K6 752 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 THOC7Q6I9Y2 204 aaKnown RBP17.1■□□□□ 0.33
SIN3A-203ENST00000394949 PAOXQ6QHF9 649 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.1■□□□□ 0.33
SIN3A-203ENST00000394949 C7orf43Q8WVR3 580 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 SUSD6Q92537 303 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 PFDN2Q9UHV9 154 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 PCDHB1Q9Y5F3 818 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 CHST10O43529 356 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 C8BP07358 591 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 METTL3Q86U44 580 aaKnown RBP17.1■□□□□ 0.33
SIN3A-203ENST00000394949 ZNF567Q8N184 647 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 ARHGEF4Q9NR80 690 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 ADAMDEC1O15204 470 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 PKMP14618 531 aaKnown RBP17.1■□□□□ 0.33
SIN3A-203ENST00000394949 EEFSECP57772 596 aaKnown RBP17.1■□□□□ 0.33
SIN3A-203ENST00000394949 NIPAL1Q6NVV3 410 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 TMEM138Q9NPI0 162 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 NUDT4Q9NZJ9 180 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 GIT1Q9Y2X7 761 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 ABL2P42684 1182 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 SKP1P63208 163 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 DAG1Q14118 895 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 SLC9B1Q4ZJI4 515 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 CLEC6AQ6EIG7 209 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 TRMT10BQ6PF06 316 aaKnown RBP17.1■□□□□ 0.33
SIN3A-203ENST00000394949 GPR142Q7Z601 462 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 OR5K1Q8NHB7 308 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 NCKAP1Q9Y2A7 1128 aa17.1■□□□□ 0.33
SIN3A-203ENST00000394949 XRCC1P18887 633 aaPredicted RBP17.09■□□□□ 0.33
SIN3A-203ENST00000394949 EPORP19235 508 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 GPR158Q5T848 1215 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 DDI2Q5TDH0 399 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 ABHD15Q6UXT9 468 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 UTS2BQ765I0 119 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 ADGRG6Q86SQ4 1221 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 ELMO1Q92556 727 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 FAM92AA1XBS5 289 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 ARHGEF33A8MVX0 844 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 EI24O14681 340 aa17.09■□□□□ 0.33
SIN3A-203ENST00000394949 PENKP01210 267 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms