RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LRRC49Q8IUZ0 686 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 LPCAT1Q8NF37 534 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 TEKT4Q8WW24 435 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 FAM83DQ9H4H8 585 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 RMI1Q9H9A7 625 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 PRDM8Q9NQV8 689 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 RBM22Q9NW64 420 aaKnown RBP eCLIP20.88■□□□□ 0.932e-8■□□□□ 8.6
TRAF4-203ENST00000394925 AIPL1Q9NZN9 384 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 KCTD3Q9Y597 815 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 PCDHB3Q9Y5E6 796 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 MN1Q10571 1320 aaPredicted RBP20.87■□□□□ 0.93
TRAF4-203ENST00000394925 C1orf232A0A0U1RR37 186 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 OR5K4A6NMS3 321 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 K7EM74 188 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 GRID2O43424 1007 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 MFSD11O43934 449 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 SKILP12757 684 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 IL4RP24394 825 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 GARSP41250 739 aaKnown RBP20.87■□□□□ 0.93
TRAF4-203ENST00000394925 PRKCIP41743 596 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 SPINT3P49223 89 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 ZNF165P49910 485 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 ERV3-1Q14264 604 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 PIGHQ14442 188 aaPredicted RBP20.87■□□□□ 0.93
TRAF4-203ENST00000394925 CCDC122Q5T0U0 273 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 HENMT1Q5T8I9 393 aaKnown RBP20.87■□□□□ 0.93
TRAF4-203ENST00000394925 ALG1LQ6GMV1 187 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 PHYKPLQ8IUZ5 450 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 RAVER1Q8IY67 606 aaKnown RBP20.87■□□□□ 0.93
TRAF4-203ENST00000394925 MAML1Q92585 1016 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 MIB2Q96AX9 1013 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 BTBD6Q96KE9 485 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 C9orf72Q96LT7 481 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 PCDH9Q9HC56 1237 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 ARFGAP3Q9NP61 516 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 CROTQ9UKG9 612 aa20.87■□□□□ 0.93
TRAF4-203ENST00000394925 BLACEA4D250 179 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 LILRA5A6NI73 299 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 MKRN2OSH3BPM6 223 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 MATN3O15232 486 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 NUAK1O60285 661 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 CD48P09326 243 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 ANKRD34CP0C6C1 535 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 TYRP1P17643 537 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 CA4P22748 312 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 CES1P23141 567 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 SEPHS1P49903 392 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 MLLT10P55197 1068 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 SLC25A11Q02978 314 aaKnown RBP20.86■□□□□ 0.93
TRAF4-203ENST00000394925 GALNT2Q10471 571 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 C6orf15Q6UXA7 325 aaPredicted RBP20.86■□□□□ 0.93
TRAF4-203ENST00000394925 AOPEPQ8N6M6 819 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 TEX19Q8NA77 164 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 GALNT6Q8NCL4 622 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 ARRDC2Q8TBH0 407 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 PLEKHG4BQ96PX9 1271 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 PSMG3-AS1Q96PY0 264 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 LYSMD1Q96S90 227 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 ISCUQ9H1K1 167 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 CARD9Q9H257 536 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 OSGEPL1Q9H4B0 414 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 RTN4Q9NQC3 1192 aaKnown RBP20.86■□□□□ 0.93
TRAF4-203ENST00000394925 PKD2L2Q9NZM6 624 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 OGFRQ9NZT2 677 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 ATXN10Q9UBB4 475 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 NOTCH2Q04721 2471 aa20.86■□□□□ 0.93
TRAF4-203ENST00000394925 KATNA1O75449 491 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 FURINP09958 794 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 ZNF8P17098 575 aaPredicted RBP20.85■□□□□ 0.93
TRAF4-203ENST00000394925 UBE2IP63279 158 aaKnown RBP20.85■□□□□ 0.93
TRAF4-203ENST00000394925 SH3BP2P78314 561 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 NIPAL4Q0D2K0 466 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 ANKRD20A8PQ5CZ79 823 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 ZNF648Q5T619 568 aaPredicted RBP20.85■□□□□ 0.93
TRAF4-203ENST00000394925 TIGD7Q6NT04 549 aaPredicted RBP20.85■□□□□ 0.93
TRAF4-203ENST00000394925 ATCAYQ86WG3 371 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 AVL9Q8NBF6 648 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 LRRN4Q8WUT4 740 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 ELMO2Q96JJ3 720 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 TGM7Q96PF1 710 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 OR6C1Q96RD1 312 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 KLC4Q9NSK0 619 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 SCHIP1Q9P0W5 487 aaPredicted RBP20.85■□□□□ 0.93
TRAF4-203ENST00000394925 RCOR3Q9P2K3 495 aaPredicted RBP20.85■□□□□ 0.93
TRAF4-203ENST00000394925 ZNF106Q9H2Y7 1883 aaKnown RBP20.85■□□□□ 0.93
TRAF4-203ENST00000394925 ICE1Q9Y2F5 2266 aa20.85■□□□□ 0.93
TRAF4-203ENST00000394925 KIAA0754O94854 1291 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 UBXN7O94888 489 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 C9P02748 559 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 HLA-DQB2P05538 268 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 AMD1P17707 334 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 SSR1P43307 286 aaKnown RBP20.84■□□□□ 0.93
TRAF4-203ENST00000394925 RPL26P61254 145 aaKnown RBP20.84■□□□□ 0.93
TRAF4-203ENST00000394925 QPCTQ16769 361 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 NCBP2-AS2Q69YL0 99 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 TCTN3Q6NUS6 607 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 RASGRP3Q8IV61 690 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 CCHCR1Q8TD31 782 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 STAMBPL1Q96FJ0 436 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 OR2AG1Q9H205 316 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms