RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 ZMIZ2Q8NF64 920 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 APBB2Q92870 758 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 YIPF6Q96EC8 236 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 SIGLEC10Q96LC7 697 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 CEP19Q96LK0 163 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 TEKT5Q96M29 485 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 SECISBP2Q96T21 854 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 SLC30A3Q99726 388 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 EBNA1BP2Q99848 306 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 SP110Q9HB58 689 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 GTSE1Q9NYZ3 720 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 INTS6Q9UL03 887 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 RAB19A4D1S5 217 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 HNRNPCL2B2RXH8 293 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 MED26O95402 600 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 PSMD8P48556 350 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 SESN2P58004 480 aaPredicted RBP12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 MYL6P60660 151 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 NFE2L1Q14494 772 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 CLCA4Q14CN2 919 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 AOC3Q16853 763 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 FLYWCH1Q4VC44 716 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 SBK1Q52WX2 424 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 ZBTB33Q86T24 672 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 AADATQ8N5Z0 425 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 KCTD6Q8NC69 237 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 FBXL13Q8NEE6 735 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 PYCR2Q96C36 320 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 CERS2Q96G23 380 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 ELOVL6Q9H5J4 265 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 NGRNQ9NPE2 291 aaKnown RBP12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 CCDC59Q9P031 241 aaKnown RBP12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 RGS17Q9UGC6 210 aaPredicted RBP12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 PCDHGB3Q9Y5G1 929 aa12.46□□□□□ -0.41
SLC28A1-203ENST00000394573 CACNA1SQ13698 1873 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 CHADO15335 359 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 LCKP06239 509 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 CYP3A5P20815 502 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 KCNC1P48547 511 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 MASP1P48740 699 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 OSTNP61366 133 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 ZNF543Q08ER8 600 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 CBX2Q14781 532 aaPredicted RBP12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 LEXMQ3ZCV2 418 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 FUT11Q495W5 492 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 ZMAT1Q5H9K5 638 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 STXBP5Q5T5C0 1151 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 LAMTOR1Q6IAA8 161 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 FBXO11Q86XK2 927 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 TIGD4Q8IY51 512 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 PQLC3Q8N755 202 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 EMC1Q8N766 993 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 PLD5Q8N7P1 536 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 FNDC5Q8NAU1 212 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 B3GNT2Q9NY97 397 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 COL20A1Q9P218 1284 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 AGO1Q9UL18 857 aaKnown RBP12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 PCDHGA9Q9Y5G4 932 aaKnown RBP12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 ACTL7AQ9Y615 435 aa12.46□□□□□ -0.42
SLC28A1-203ENST00000394573 MN1Q10571 1320 aaPredicted RBP12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 CNTNAP1P78357 1384 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 A0A0B4J293 547 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 H0YAE9 185 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 SDHDO14521 159 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 OGTO15294 1046 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 PTP4A3O75365 173 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 CDK14O94921 469 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 SNRPB2P08579 225 aaKnown RBP12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 HNRNPLP14866 589 aaKnown RBP eCLIP12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 RPL17P18621 184 aaKnown RBP12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 KDELR1P24390 212 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 DNAJB1P25685 340 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 ERP29P30040 261 aaKnown RBP12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 GNA15P30679 374 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 KRR1Q13601 381 aaKnown RBP12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 SETMARQ53H47 684 aaPredicted RBP12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 SV2AQ7L0J3 742 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 SPATA6LQ8N4H0 392 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 AGBL3Q8NEM8 1001 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 ACVR1CQ8NER5 493 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 USP7Q93009 1102 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 RNF31Q96EP0 1072 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 FOPNLQ96NB1 174 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 OR2A14Q96R47 310 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 CPXM1Q96SM3 734 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 KCNS3Q9BQ31 491 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 NAT9Q9BTE0 207 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 AMBRA1Q9C0C7 1298 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 TINAGL1Q9GZM7 467 aaPredicted RBP12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 MMP27Q9H306 513 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 FBRSL1Q9HCM7 1045 aaKnown RBP12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 SLAMF7Q9NQ25 335 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 KMT5AQ9NQR1 393 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 DCAF16Q9NXF7 216 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 TFCP2L1Q9NZI6 479 aa12.45□□□□□ -0.42
SLC28A1-203ENST00000394573 WRAP73Q9P2S5 460 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms