RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 SQSTM1Q13501 440 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 STIM1Q13586 685 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 KRTAP21-3Q3LHN1 58 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 ZRANB3Q5FWF4 1079 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 NKAIN2Q5VXU1 208 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 RRAGAQ7L523 313 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 ENOSF1Q7L5Y1 443 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 ZAR1Q86SH2 424 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 CDH24Q86UP0 819 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 SLC47A2Q86VL8 602 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 RASGRP3Q8IV61 690 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 APLFQ8IW19 511 aaPredicted RBP7.85□□□□□ -1.15
CASP4-201ENST00000393150 DRC7Q8IY82 874 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 MSANTD4Q8NCY6 345 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 ARHGEF2Q92974 986 aaKnown RBP7.85□□□□□ -1.15
CASP4-201ENST00000393150 CTRCQ99895 268 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 TTYH3Q9C0H2 523 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 MAGEH1Q9H213 219 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 EPB41L1Q9H4G0 881 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 SUDS3Q9H7L9 328 aaPredicted RBP7.85□□□□□ -1.15
CASP4-201ENST00000393150 TRNAU1APQ9NX07 287 aaKnown RBP7.85□□□□□ -1.15
CASP4-201ENST00000393150 OCIAD1Q9NX40 245 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.85□□□□□ -1.15
CASP4-201ENST00000393150 TAAR2Q9P1P5 351 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 PADI1Q9ULC6 663 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 PNMA8BQ9ULN7 279 aaPredicted RBP7.85□□□□□ -1.15
CASP4-201ENST00000393150 PCDHB10Q9UN67 800 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 SCN8AQ9UQD0 1980 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 COQ6Q9Y2Z9 468 aa7.85□□□□□ -1.15
CASP4-201ENST00000393150 TMEM184BQ9Y519 407 aaPredicted RBP7.85□□□□□ -1.15
CASP4-201ENST00000393150 CELSR2Q9HCU4 2923 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 PRRC2CQ9Y520 2896 aaKnown RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 IGHV1OR21-1A0A087WYE8 117 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 ARHGAP10A1A4S6 786 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 PRSS38A1L453 326 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 TCP11X1B4DZS4 312 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 KLHL41O60662 606 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 ZNF821O75541 412 aaPredicted RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 DAB1O75553 588 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 CREG1O75629 220 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 ZMPSTE24O75844 475 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 CLDN1O95832 211 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 ELFN1P0C7U0 828 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 SLC2A4P14672 509 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 GKP32189 559 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 SYKP43405 635 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 MAPKAPK2P49137 400 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 FMO5P49326 533 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 CXCR3P49682 368 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 CCL11P51671 97 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 RPS15P62841 145 aaKnown RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 ARF5P84085 180 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 SLC6A3Q01959 620 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 EIF4EBP2Q13542 120 aaPredicted RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 DOC2BQ14184 412 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 NR1D2Q14995 579 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 TAF5Q15542 800 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 CHRNA6Q15825 494 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 UGP2Q16851 508 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 CCDC40Q4G0X9 1142 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 LRRC73Q5JTD7 316 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 NKAPLQ5M9Q1 402 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 MRM1Q6IN84 353 aaKnown RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 DENND1BQ6P3S1 775 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 SLC30A9Q6PML9 568 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 WDR74Q6RFH5 385 aaPredicted RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 PLXDC1Q8IUK5 500 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 RHOT1Q8IXI2 618 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 AVL9Q8NBF6 648 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 C1orf131Q8NDD1 294 aaKnown RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 ZNF606Q8WXB4 792 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 OR1E3Q8WZA6 343 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 NCSTNQ92542 709 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 ZNF641Q96N77 438 aaPredicted RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 TRIM55Q9BYV6 548 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 ARHGEF38Q9NXL2 777 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 PPARGC1AQ9UBK2 798 aaKnown RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 PCDHA7Q9UN72 937 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 MTMR6Q9Y217 621 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 ENTPD4Q9Y227 616 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 PCDHGA9Q9Y5G4 932 aaKnown RBP7.84□□□□□ -1.15
CASP4-201ENST00000393150 F8P00451 2351 aa7.84□□□□□ -1.15
CASP4-201ENST00000393150 CRYBG3Q68DQ2 2970 aa7.84□□□□□ -1.16
CASP4-201ENST00000393150 GOLGA6CA6NDK9 693 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 GOLGA6BA6NDN3 693 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 TMEM202A6NGA9 273 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 C21orf140B9A014 251 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 RASA4BC9J798 803 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 RNF103O00237 685 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 PMM2O15305 246 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 RASA4O43374 803 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 LDLRP01130 860 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 FGF1P05230 155 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 HSP90AA1P07900 732 aaKnown RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 GOLGA6DP0CG33 693 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 GARSP41250 739 aaKnown RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 GNPDA1P46926 289 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 IRAK1P51617 712 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 PMS1P54277 932 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms