RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GPR135Q8IZ08 494 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 NXNL1Q96CM4 212 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 RETREG1Q9H6L5 497 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 NR2E1Q9Y466 385 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 RIPK2O43353 540 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 VARSP26640 1264 aaKnown RBP14.67□□□□□ -0.06
CCDC50-201ENST00000392455 ACSL1P33121 698 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 UFD1Q92890 307 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 TMEM184CQ9NVA4 438 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 C5orf51A6NDU8 294 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 AGRPO00253 132 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 ERBB2P04626 1255 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 LINGO3P0C6S8 592 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 DNAJB8Q8NHS0 232 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 EBNA1BP2Q99848 306 aaKnown RBP14.67□□□□□ -0.06
CCDC50-201ENST00000392455 TMEM39AQ9NV64 488 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 SMPD4Q9NXE4 827 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 KLQ9UEF7 1012 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 C1orf167Q5SNV9 1468 aa14.67□□□□□ -0.06
CCDC50-201ENST00000392455 CLCA1A8K7I4 914 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 H3BRB1 525 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 TAL1P17542 331 aaPredicted RBP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 HERVK_113P62684 666 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 RAB39AQ14964 217 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 PGM5Q15124 567 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 OR4A15Q8NGL6 344 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 KLHL15Q96M94 604 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 TUT1Q9H6E5 874 aaKnown RBP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 IKZF2Q9UKS7 526 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 PHF24Q9UPV7 400 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 LAMP2P13473 410 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 CPTPQ5TA50 214 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 OGFRL1Q5TC84 451 aaPredicted RBP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 C19orf12Q9NSK7 152 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 AIREO43918 545 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 MGAT1P26572 445 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 MLLT6P55198 1093 aaPredicted RBP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 TLE3Q04726 772 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 LAPTM4BQ86VI4 370 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 GHDCQ8N2G8 530 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 DNERQ8NFT8 737 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 ZNF347Q96SE7 839 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 SLC22A4Q9H015 551 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 CAPN6Q9Y6Q1 641 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 TRAV19A0A0A6YYK7 116 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 RORCP51449 518 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 CRISP1P54107 249 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 RAPSNQ13702 412 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 C3orf67Q6ZVT6 689 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 PGM2Q96G03 612 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 CNDP2Q96KP4 475 aaKnown RBP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 ABCC13Q9NSE7 274 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 USP31Q70CQ4 1352 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 HGFP14210 728 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 TDGQ13569 410 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 ZNF571Q7Z3V5 609 aaPredicted RBP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 MARK4Q96L34 752 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 TCF7L1Q9HCS4 588 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 ATP13A1Q9HD20 1204 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 PDHXO00330 501 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 DCLK1O15075 740 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 SPARCP09486 303 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 SLC35G4P0C7Q5 338 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 GADD45AP24522 165 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 THAP5Q7Z6K1 395 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 SCUBE3Q8IX30 993 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 RBFAQ8N0V3 343 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 TATDN2Q93075 761 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 PNPLA2Q96AD5 504 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 PPCDCQ96CD2 204 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 SLC39A3Q9BRY0 314 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 SPATC1LQ9H0A9 340 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 TRPV2Q9Y5S1 764 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 BTBD19C9JJ37 291 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 BCKDKO14874 412 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 ZNF823P16415 610 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 GRIA1P42261 906 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 PARP6Q2NL67 630 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 APTXQ7Z2E3 356 aaKnown RBP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 C11orf65Q8NCR3 313 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 EZH1Q92800 747 aaPredicted RBP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 UPF1Q92900 1129 aaKnown RBP eCLIP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 OR52E6Q96RD3 313 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 KCTD15Q96SI1 283 aaPredicted RBP14.66□□□□□ -0.06
CCDC50-201ENST00000392455 SLC4A5Q9BY07 1137 aa14.66□□□□□ -0.06
CCDC50-201ENST00000392455 FAM234BA2RU67 622 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 PIGNO95427 931 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 ABHD2P08910 425 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 SNAPC1Q16533 368 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 METTL7BQ6UX53 244 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 LGI2Q8N0V4 545 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 RAB2BQ8WUD1 216 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 TAPBPLQ9BX59 468 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 SSX4O60224 188 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 CYP1A2P05177 515 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 CHKAP35790 457 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 DLSTP36957 453 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 FBXO43Q4G163 708 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 XKR6Q5GH73 641 aa14.65□□□□□ -0.06
CCDC50-201ENST00000392455 RNF19BQ6ZMZ0 732 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms