RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 POLG2Q9UHN1 485 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 GJD2Q9UKL4 321 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 CAMK2AQ9UQM7 478 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 FAM237AA0A1B0GTK4 181 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 M0QZ24 198 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 ANKRD28O15084 1053 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 CIDEAO60543 219 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 WISP2O76076 250 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 NKX2-2O95096 273 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 KCNK5O95279 499 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 HMGB1P09429 215 aaKnown RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 ERVK-10P10266 1014 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 EPHA8P29322 1005 aaPredicted RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 HOXC9P31274 260 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 ICAM3P32942 547 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 PAFAH1B1P43034 410 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 CTCFP49711 727 aaPredicted RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 TERF1P54274 439 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 FOXD4Q12950 439 aaPredicted RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 GSTA3Q16772 222 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 TECRLQ5HYJ1 363 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 ZC2HC1BQ5TFG8 222 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 FAM53AQ6NSI3 398 aaPredicted RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 PAPD4Q6PIY7 484 aaKnown RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 PIWIL4Q7Z3Z4 852 aaKnown RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 TRPT1Q86TN4 253 aaKnown RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 ZNF248Q8NDW4 579 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 TRIM58Q8NG06 486 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 NFKBIDQ8NI38 313 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 ST8SIA4Q92187 359 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 STAMBPL1Q96FJ0 436 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 MOV10L1Q9BXT6 1211 aaKnown RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 USP44Q9H0E7 712 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 LUZP4Q9P127 313 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 NAALADL1Q9UQQ1 740 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 CYP46A1Q9Y6A2 500 aa3.12□□□□□ -1.91
TRAV40-201ENST00000390467 TP53BP1Q12888 1972 aaPredicted RBP3.12□□□□□ -1.91
TRAV40-201ENST00000390467 A0A1B0GVY2 172 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 TTC36A6NLP5 189 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 HS3ST1O14792 307 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 BAG4O95429 457 aaKnown RBP3.11□□□□□ -1.91
TRAV40-201ENST00000390467 ZNF182P17025 639 aaPredicted RBP3.11□□□□□ -1.91
TRAV40-201ENST00000390467 UGT1A1P22309 533 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 UBA1P22314 1058 aaKnown RBP3.11□□□□□ -1.91
TRAV40-201ENST00000390467 HARS2P49590 506 aaKnown RBP3.11□□□□□ -1.91
TRAV40-201ENST00000390467 TUBP50607 506 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 GRIK2Q13002 908 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 MAD2L1Q13257 205 aaPredicted RBP3.11□□□□□ -1.91
TRAV40-201ENST00000390467 LCN10Q6JVE6 187 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 RBMS3Q6XE24 437 aaKnown RBP3.11□□□□□ -1.91
TRAV40-201ENST00000390467 Q75L30 129 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 HEATR4Q86WZ0 1026 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 CNTROBQ8N137 903 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 MAPK1IP1LQ8NDC0 245 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 PHF21AQ96BD5 680 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 ARHGEF26Q96DR7 871 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 LRR1Q96L50 414 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 SCLT1Q96NL6 688 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 PIP5K1AQ99755 562 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 AGXT2Q9BYV1 514 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 SCPEP1Q9HB40 452 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 HAO1Q9UJM8 370 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 CLIC4Q9Y696 253 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 KDM3AQ9Y4C1 1321 aa3.11□□□□□ -1.91
TRAV40-201ENST00000390467 C1orf226A1L170 272 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 KCNN4O15554 427 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 TGFB1I1O43294 461 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 EXTL3O43909 919 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 PCDH7O60245 1069 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 TSHBP01222 138 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 CD48P09326 243 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 PRSS56P0CW18 603 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 CSF2RAP15509 400 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 GNB3P16520 340 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 CHRNB4P30926 498 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 ARL1P40616 181 aaPredicted RBP3.1□□□□□ -1.91
TRAV40-201ENST00000390467 CCT5P48643 541 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 F2RL1P55085 397 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 KRTAP10-3P60369 221 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 MBTD1Q05BQ5 628 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 SPOCK1Q08629 439 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 MYLK3Q32MK0 819 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 ZC2HC1CQ53FD0 456 aaPredicted RBP3.1□□□□□ -1.91
TRAV40-201ENST00000390467 ZNF772Q68DY9 489 aaPredicted RBP3.1□□□□□ -1.91
TRAV40-201ENST00000390467 TSSK4Q6SA08 328 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 PLXDC2Q6UX71 529 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 DBF4BQ8NFT6 615 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 TMEM190Q8WZ59 177 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 SAAL1Q96ER3 474 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 SMC6Q96SB8 1091 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 LRMDAQ9H2I8 198 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 PIGMQ9H3S5 423 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 TCP11L1Q9NUJ3 509 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 CACNA1FO60840 1977 aa3.1□□□□□ -1.91
TRAV40-201ENST00000390467 PYGLP06737 847 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 RNF224P0DH78 156 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 MCCP23508 829 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 HOXC8P31273 242 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 MAPK9P45984 424 aa3.09□□□□□ -1.91
TRAV40-201ENST00000390467 DRG2P55039 364 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms