RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 NUAK1O60285 661 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 SERPINC1P01008 464 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 SERPING1P05155 500 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 HLA-DQB2P05538 268 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 ANKRD34CP0C6C1 535 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 ACP5P13686 325 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 SSR1P43307 286 aaKnown RBP17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 MC1RQ01726 317 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 NIPAL4Q0D2K0 466 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 MAP7Q14244 749 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 PLXDC1Q8IUK5 500 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 KCTD6Q8NC69 237 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 HDAC11Q96DB2 347 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 MLPHQ9BV36 600 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 UCK1Q9HA47 277 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 CPNE7Q9UBL6 633 aa17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 MN1Q10571 1320 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-201ENST00000383820 BSNQ9UPA5 3926 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 LOC101059948A0A1B0GTJ6 334 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 ANKRD66B4E2M5 251 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 GPR89AB7ZAQ6 455 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 NKX2-8O15522 239 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 GRID2O43424 1007 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 STK17BO94768 372 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 GPR89BP0CG08 455 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 NOP2P46087 812 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 CDC20Q12834 499 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 QPCTQ16769 361 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 ALKBH5Q6P6C2 394 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 TIPARPQ7Z3E1 657 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 PTRH1Q86Y79 214 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 PHYKPLQ8IUZ5 450 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 FAF2Q96CS3 445 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 IQCDQ96DY2 449 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 CTRCQ99895 268 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 ADGRE3Q9BY15 652 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 TMEM63CQ9P1W3 806 aa17.68■□□□□ 0.42
RPUSD3-201ENST00000383820 A0A087X0T9 212 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 POLR1CO15160 346 aaPredicted RBP17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 SNX2O60749 519 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 DLGAP3O95886 979 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 FAM228BP0C875 321 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 CASRP41180 1078 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 UBE2IP63279 158 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 ATP13A4Q4VNC1 1196 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 COLEC12Q5KU26 742 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 KDELC2Q7Z4H8 507 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 CCDC13Q8IYE1 715 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 ESX1Q8N693 406 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 C9orf43Q8TAL5 461 aaPredicted RBP17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 APMAPQ9HDC9 416 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 SIDT1Q9NXL6 827 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 NFKBIL1Q9UBC1 381 aaPredicted RBP17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 LCMT1Q9UIC8 334 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 ADGRG1Q9Y653 693 aa17.67■□□□□ 0.42
RPUSD3-201ENST00000383820 TOX3O15405 576 aaPredicted RBP17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 C9P02748 559 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 MMP2P08253 660 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 KRT7P08729 469 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 XRCC1P18887 633 aaPredicted RBP17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 MAPK9P45984 424 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 DCDC1P59894 354 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 ZBED6P86452 979 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 GBE1Q04446 702 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 IQCB1Q15051 598 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 PDPK2PQ6A1A2 396 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 CCNYQ8ND76 341 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 APOBEC4Q8WW27 367 aaKnown RBP17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 STARD8Q92502 1023 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 ZSCAN5AQ9BUG6 496 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 TBC1D10AQ9BXI6 508 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 EPN3Q9H201 632 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 TRIM39Q9HCM9 518 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 RAD18Q9NS91 495 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 ATXN10Q9UBB4 475 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 PTPN13Q12923 2485 aa17.66■□□□□ 0.42
RPUSD3-201ENST00000383820 NAV2Q8IVL1 2488 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 PROSCO94903 275 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 SLC25A14O95258 325 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 PRKAR1AP10644 381 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 ZNF8P17098 575 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 OAS2P29728 719 aaKnown RBP17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 GJC1P36383 396 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 PBX1P40424 430 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 CD86P42081 329 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 STAT5AP42229 794 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 IFI35P80217 286 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 SRSF1Q07955 248 aaKnown RBP eCLIP17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 SLC10A2Q12908 348 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 NFKBIBQ15653 356 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 SKIDA1Q1XH10 827 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 ZNF569Q5MCW4 686 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 PQLC3Q8N755 202 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 C9orf72Q96LT7 481 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 ZNF830Q96NB3 372 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 PLEKHG4BQ96PX9 1271 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 ZFYVE1Q9HBF4 777 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 PRDM8Q9NQV8 689 aa17.65■□□□□ 0.42
RPUSD3-201ENST00000383820 DTLQ9NZJ0 730 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms