RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 HTRA2O43464 458 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 KLK8O60259 260 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 TBX10O75333 385 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 VPS4BO75351 444 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 SUPT3HO75486 399 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 GPC4O75487 556 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 SKAP2O75563 359 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 JUNP05412 331 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 C8AP07357 584 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 MTHFD2P13995 350 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 GFAPP14136 432 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 ATP6V1C1P21283 382 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 CA8P35219 290 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 KCNC1P48547 511 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 NUDT2P50583 147 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 PTPN5P54829 565 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 XIAPP98170 497 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 NHLH1Q02575 133 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 OR4D1Q15615 310 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 MUM1Q2TAK8 710 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 ANKS6Q68DC2 871 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 PSAPL1Q6NUJ1 521 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 PAQR3Q6TCH7 311 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 BNC2Q6ZN30 1099 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 TMCO2Q7Z6W1 182 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 RYBPQ8N488 228 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 FBXO39Q8N4B4 442 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 MAB21L3Q8N8X9 362 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 KREMEN2Q8NCW0 462 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 PIH1D2Q8WWB5 315 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 DNAJC9Q8WXX5 260 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 ISG20Q96AZ6 181 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 NAF1Q96HR8 494 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 PPP1R36Q96LQ0 422 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 TUBGCP5Q96RT8 1024 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 GPR21Q99679 349 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 NUSAP1Q9BXS6 441 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 ATP13A3Q9H7F0 1226 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 PFDN4Q9NQP4 134 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 BATF3Q9NR55 127 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 APPL1Q9UKG1 709 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 LZTS1Q9Y250 596 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 MED16Q9Y2X0 877 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 PCDHB9Q9Y5E1 797 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 IRAK3Q9Y616 596 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 SCN8AQ9UQD0 1980 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 A0A0J9YYE9 177 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 E5RI56 91 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 H3BMM5 538 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 UBXN8O00124 270 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 LEFTY2O00292 366 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 PRMT5O14744 637 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 AZIN1O14977 448 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CXCL14O95715 111 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 TRBC1P01850 177 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 RPS17P08708 135 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 PRSS56P0CW18 603 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ANPEPP15144 967 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ZNF7P17097 686 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 SERPINA4P29622 427 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ACADVLP49748 655 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 IL2P60568 153 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 STX1BP61266 288 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ZXDBP98169 803 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 LMAN2Q12907 356 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 LCP2Q13094 533 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ART3Q13508 389 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 PLEKHG6Q3KR16 790 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 SETMARQ53H47 684 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CTSL3PQ5NE16 218 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ATXN7L2Q5T6C5 722 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 KANK2Q63ZY3 851 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 TAS2R42Q7RTR8 314 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 BBS7Q8IWZ6 715 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 DSELQ8IZU8 1212 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 APCDD1Q8J025 514 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CBARPQ8N350 705 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 PNPLA1Q8N8W4 532 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 GRIN3AQ8TCU5 1115 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 WFDC5Q8TCV5 224 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CLP1Q92989 425 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 EXT2Q93063 718 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 PDLIM5Q96HC4 596 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ZBED2Q9BTP6 218 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 P2RY12Q9H244 342 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 VCX3BQ9H321 246 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 S100A14Q9HCY8 104 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 POMPQ9Y244 141 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 FAM50BQ9Y247 325 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 MTCL1Q9Y4B5 1905 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 A0A1W2PQ67 120 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CAPN8A6NHC0 703 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 PRR33A8MZF0 331 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 UBFD1O14562 309 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 AIM2O14862 343 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 MAP3K7O43318 606 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CLASP2O75122 1294 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ECI2O75521 394 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 MLYCDO95822 493 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 GLUD1P00367 558 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms