RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 NCSTNQ92542 709 aa22.97■■□□□ 1.27
C9orf47-202ENST00000375850 ZNF830Q96NB3 372 aaPredicted RBP22.97■■□□□ 1.27
C9orf47-202ENST00000375850 UCK1Q9HA47 277 aa22.97■■□□□ 1.27
C9orf47-202ENST00000375850 TMEM184BQ9Y519 407 aaPredicted RBP22.97■■□□□ 1.27
C9orf47-202ENST00000375850 LILRA5A6NI73 299 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 NUAK1O60285 661 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 EML2O95834 649 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 ANKRD34CP0C6C1 535 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 NFATC2Q13469 925 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 MAP7Q14244 749 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 CCDC13Q8IYE1 715 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 FAF2Q96CS3 445 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 SMIM14Q96QK8 99 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 WDR24Q96S15 920 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 UVRAGQ9P2Y5 699 aa22.96■■□□□ 1.27
C9orf47-202ENST00000375850 OAS3Q9Y6K5 1087 aaKnown RBP22.96■■□□□ 1.27
C9orf47-202ENST00000375850 A0A087X0T9 212 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 GRID2O43424 1007 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 HLA-DQB2P05538 268 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 FAM228BP0C875 321 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 ACP5P13686 325 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 NIPAL4Q0D2K0 466 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 IHHQ14623 411 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 NFKBIBQ15653 356 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 QPCTQ16769 361 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 SNAP47Q5SQN1 464 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 PDPK2PQ6A1A2 396 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.95■■□□□ 1.26
C9orf47-202ENST00000375850 CPNE7Q9UBL6 633 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 ANAPC2Q9UJX6 822 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 CAPN11Q9UMQ6 739 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 KCNK6Q9Y257 313 aa22.95■■□□□ 1.26
C9orf47-202ENST00000375850 MN1Q10571 1320 aaPredicted RBP22.94■■□□□ 1.26
C9orf47-202ENST00000375850 A8MU76 341 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 FADS2P1A8MWK0 482 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 POLR1CO15160 346 aaPredicted RBP22.94■■□□□ 1.26
C9orf47-202ENST00000375850 TOX3O15405 576 aaPredicted RBP22.94■■□□□ 1.26
C9orf47-202ENST00000375850 PROSCO94903 275 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 DCDC1P59894 354 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 TLE1Q04724 770 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 IQCB1Q15051 598 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 ESX1Q8N693 406 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 CCNYQ8ND76 341 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 ZSCAN5AQ9BUG6 496 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 NFKBIL1Q9UBC1 381 aaPredicted RBP22.94■■□□□ 1.26
C9orf47-202ENST00000375850 LUC7L2Q9Y383 392 aaKnown RBP22.94■■□□□ 1.26
C9orf47-202ENST00000375850 PRKAB1Q9Y478 270 aa22.94■■□□□ 1.26
C9orf47-202ENST00000375850 STK17BO94768 372 aa22.93■■□□□ 1.26
C9orf47-202ENST00000375850 MTA2O94776 668 aa22.93■■□□□ 1.26
C9orf47-202ENST00000375850 PBX1P40424 430 aa22.93■■□□□ 1.26
C9orf47-202ENST00000375850 ZNF569Q5MCW4 686 aa22.93■■□□□ 1.26
C9orf47-202ENST00000375850 KDELC2Q7Z4H8 507 aa22.93■■□□□ 1.26
C9orf47-202ENST00000375850 SRPK1Q96SB4 655 aaKnown RBP22.93■■□□□ 1.26
C9orf47-202ENST00000375850 ZFYVE1Q9HBF4 777 aa22.93■■□□□ 1.26
C9orf47-202ENST00000375850 TRIM39Q9HCM9 518 aa22.93■■□□□ 1.26
C9orf47-202ENST00000375850 CTTNBP2NLQ9P2B4 639 aa22.93■■□□□ 1.26
C9orf47-202ENST00000375850 PCYT1BQ9Y5K3 369 aaPredicted RBP22.93■■□□□ 1.26
C9orf47-202ENST00000375850 ZNF487B1APH4 448 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 SNX2O60749 519 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 XRCC1P18887 633 aaPredicted RBP22.92■■□□□ 1.26
C9orf47-202ENST00000375850 GJC1P36383 396 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 CD86P42081 329 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 UBE2IP63279 158 aaKnown RBP22.92■■□□□ 1.26
C9orf47-202ENST00000375850 IFI35P80217 286 aaPredicted RBP22.92■■□□□ 1.26
C9orf47-202ENST00000375850 GBE1Q04446 702 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 PPIDQ08752 370 aaKnown RBP22.92■■□□□ 1.26
C9orf47-202ENST00000375850 CDC20Q12834 499 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 ATP13A4Q4VNC1 1196 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 C9orf43Q8TAL5 461 aaPredicted RBP22.92■■□□□ 1.26
C9orf47-202ENST00000375850 APOBEC4Q8WW27 367 aaKnown RBP22.92■■□□□ 1.26
C9orf47-202ENST00000375850 CTRCQ99895 268 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 DTLQ9NZJ0 730 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 ATXN10Q9UBB4 475 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 ADGRG1Q9Y653 693 aa22.92■■□□□ 1.26
C9orf47-202ENST00000375850 UBR5O95071 2799 aaPredicted RBP22.92■■□□□ 1.26
C9orf47-202ENST00000375850 SLC25A14O95258 325 aaPredicted RBP22.91■■□□□ 1.26
C9orf47-202ENST00000375850 DLGAP3O95886 979 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 JCHAINP01591 159 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 C9P02748 559 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 MMP2P08253 660 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 H2AFZP0C0S5 128 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 CASRP41180 1078 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 MAPK9P45984 424 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 FANCCQ00597 558 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 SEPT6Q14141 434 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 SLC14A2Q15849 920 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 H2AFVQ71UI9 128 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 VSIG1Q86XK7 387 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 TRAM1L1Q8N609 369 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 PQLC3Q8N755 202 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 CTNNBL1Q8WYA6 563 aaPredicted RBP22.91■■□□□ 1.26
C9orf47-202ENST00000375850 SPATA16Q9BXB7 569 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 XPO4Q9C0E2 1151 aaKnown RBP22.91■■□□□ 1.26
C9orf47-202ENST00000375850 MAGEE1Q9HCI5 957 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 MAST4O15021 2626 aa22.91■■□□□ 1.26
C9orf47-202ENST00000375850 LOC101059948A0A1B0GTJ6 334 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 NKX2-8O15522 239 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 VIPP01282 170 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 ZNF8P17098 575 aaPredicted RBP22.9■■□□□ 1.26
C9orf47-202ENST00000375850 STAT5AP42229 794 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms