RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
VARS-215ENST00000375663 MAGP20916 626 aa16.71■□□□□ 0.27
VARS-215ENST00000375663 CDK9P50750 372 aaKnown RBP16.71■□□□□ 0.27
VARS-215ENST00000375663 YBEYP58557 167 aaPredicted RBP16.71■□□□□ 0.27
VARS-215ENST00000375663 HERVK_113P63132 956 aa16.71■□□□□ 0.27
VARS-215ENST00000375663 CEACAM7Q14002 265 aa16.71■□□□□ 0.27
VARS-215ENST00000375663 CYS1Q717R9 158 aa16.71■□□□□ 0.27
VARS-215ENST00000375663 MARVELD2Q8N4S9 558 aa16.71■□□□□ 0.27
VARS-215ENST00000375663 GATA6Q92908 595 aa16.71■□□□□ 0.27
VARS-215ENST00000375663 ABHD8Q96I13 439 aa16.71■□□□□ 0.27
VARS-215ENST00000375663 ERVK-6Q9BXR3 956 aa16.71■□□□□ 0.27
VARS-215ENST00000375663 EIF2B4Q9UI10 523 aaKnown RBP16.71■□□□□ 0.27
VARS-215ENST00000375663 CDV3Q9UKY7 258 aaKnown RBP16.71■□□□□ 0.27
VARS-215ENST00000375663 FADS2O95864 444 aaKnown RBP16.71■□□□□ 0.26
VARS-215ENST00000375663 CAPN1P07384 714 aa16.71■□□□□ 0.26
VARS-215ENST00000375663 IGFBP5P24593 272 aa16.71■□□□□ 0.26
VARS-215ENST00000375663 TUFMP49411 452 aaKnown RBP16.71■□□□□ 0.26
VARS-215ENST00000375663 BNIP3Q12983 259 aa16.71■□□□□ 0.26
VARS-215ENST00000375663 OR10A6Q8NH74 314 aa16.71■□□□□ 0.26
VARS-215ENST00000375663 POP5Q969H6 163 aaKnown RBP16.71■□□□□ 0.26
VARS-215ENST00000375663 UROC1Q96N76 676 aa16.71■□□□□ 0.26
VARS-215ENST00000375663 FCRL3Q96P31 734 aaPredicted RBP16.71■□□□□ 0.26
VARS-215ENST00000375663 IPPKQ9H8X2 491 aa16.71■□□□□ 0.26
VARS-215ENST00000375663 PCDH12Q9NPG4 1184 aa16.71■□□□□ 0.26
VARS-215ENST00000375663 EURLQ9NYK6 297 aa16.71■□□□□ 0.26
VARS-215ENST00000375663 KCNH4Q9UQ05 1017 aa16.71■□□□□ 0.26
VARS-215ENST00000375663 TAF4O00268 1085 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 ARPC2O15144 300 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 HPCAL1P37235 193 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 HCAR3P49019 387 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 MTPNP58546 118 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 PARP15Q460N3 678 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 FAM151BQ6UXP7 276 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 TMEM126BQ8IUX1 230 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 PROX1Q92786 737 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 GMLQ99445 158 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 GPATCH1Q9BRR8 931 aaKnown RBP16.7■□□□□ 0.26
VARS-215ENST00000375663 C2orf49Q9BVC5 232 aaPredicted RBP16.7■□□□□ 0.26
VARS-215ENST00000375663 DNAAF2Q9NVR5 837 aaKnown RBP16.7■□□□□ 0.26
VARS-215ENST00000375663 SLC25A13Q9UJS0 675 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 NAV1Q8NEY1 1877 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 PGK1P00558 417 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 HLA-DQB2P05538 268 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 PRKCQQ04759 706 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 HECTD3Q5T447 861 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 TRPV3Q8NET8 790 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 UBASH3BQ8TF42 649 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 LRTM1Q9HBL6 345 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 KLHL20Q9Y2M5 609 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 IRS2Q9Y4H2 1338 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 SERPINA4P29622 427 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 PBX3P40426 434 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 FCGRTP55899 365 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 LSAMPQ13449 338 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 ERMP1Q7Z2K6 904 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 SCAMP5Q8TAC9 235 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 NELL1Q92832 810 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 DEPDC7Q96QD5 511 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 DHRS4Q9BTZ2 278 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 VRTNQ9H8Y1 702 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 FBRSL1Q9HCM7 1045 aaKnown RBP16.7■□□□□ 0.26
VARS-215ENST00000375663 PDLIM7Q9NR12 457 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 STMN3Q9NZ72 180 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 GMIPQ9P107 970 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.7■□□□□ 0.26
VARS-215ENST00000375663 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
VARS-215ENST00000375663 HOXA2O43364 376 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 RNASEH2AO75792 299 aaKnown RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 TAF10Q12962 218 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 TRIM74Q86UV6 250 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 TRIM73Q86UV7 250 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 ATAD1Q8NBU5 361 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 ENKURQ8TC29 256 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 CENPIQ92674 756 aaPredicted RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 HTRA1Q92743 480 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 ACBD6Q9BR61 282 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 IFT80Q9P2H3 777 aaPredicted RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 ZNF490Q9ULM2 529 aaPredicted RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 SAMD4AQ9UPU9 718 aaKnown RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 NRP1O14786 923 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 MYL12BO14950 172 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 LRG1P02750 347 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 UGT1A6P19224 532 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 UGT1A1P22309 533 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 UGT1A4P22310 534 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 UGT1A3P35503 534 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 UGT1A5P35504 534 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 CDC42P60953 191 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 DGKKQ5KSL6 1271 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 TRIQKQ629K1 86 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 RBFAQ8N0V3 343 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 CAMKK2Q96RR4 588 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 SMAD5Q99717 465 aaKnown RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 TOR1BO14657 336 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 HTRA2O43464 458 aaPredicted RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 IL12AP29459 219 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 HSPA7P48741 367 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 NOMO2Q5JPE7 1267 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms