RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CLDN25C9JDP6 229 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 MATN2O00339 956 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 TBL1XO60907 577 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 PCDH8O95206 1070 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 SLC6A2P23975 617 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 AQP1P29972 269 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 CAPZA2P47755 286 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 TAF10Q12962 218 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 TRIM71Q2Q1W2 868 aaKnown RBP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 KCTD8Q6ZWB6 473 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 SNX27Q96L92 541 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 CRISPLD1Q9H336 500 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 RPS6KB2Q9UBS0 482 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 ATRNL1Q5VV63 1379 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 OR10H3O60404 316 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 STK16O75716 305 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 RPN2P04844 631 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 HPGDP15428 266 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 CHRNA4P43681 627 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 STX4Q12846 297 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 NCBP2-AS2Q69YL0 99 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 PDPRQ8NCN5 879 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 GRIN3AQ8TCU5 1115 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 HTRA1Q92743 480 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 SPG21Q9NZD8 308 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 IFT80Q9P2H3 777 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 PDE10AQ9Y233 779 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 PCDHB1Q9Y5F3 818 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 AQP12BA6NM10 295 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 STX16-NPEPL1H3BU86 382 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 EI24O14681 340 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 OR4F21O95013 312 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SERPINA1P01009 418 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 MMP3P08254 477 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 NR2F6P10588 404 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 CCR3P51677 355 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 C11orf88Q6PI97 169 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 CERS6Q6ZMG9 384 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 NANOGNBQ7Z5D8 188 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 AQP12AQ8IXF9 295 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 HM13Q8TCT9 377 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SIGLEC10Q96LC7 697 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 MAGEB10Q96LZ2 347 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-203ENST00000375274 TRMT13Q9NUP7 481 aaKnown RBP11.47□□□□□ -0.57
PTCH1-203ENST00000375274 TOR4AQ9NXH8 423 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 VPS51Q9UID3 782 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-203ENST00000375274 CCDC182A6NF36 153 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 MANSC4A6NHS7 340 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-203ENST00000375274 H0YC42 278 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 STK25O00506 426 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 CLDN11O75508 207 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 OR4Q2P0C623 313 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 PBX3P40426 434 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 CTSKP43235 329 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SMIM11AP58511 58 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 PTSQ03393 145 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 MERTKQ12866 999 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 ATAD1Q8NBU5 361 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SKA1Q96BD8 255 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 PDP1Q9P0J1 537 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SIRPGQ9P1W8 387 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 ENTPD4Q9Y227 616 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 LYVE1Q9Y5Y7 322 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 KLRG2A4D1S0 409 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SLC25A14O95258 325 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-203ENST00000375274 CAPN1P07384 714 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SEPHS1P49903 392 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 MAP2K5Q13163 448 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 BTG3Q14201 252 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-203ENST00000375274 MACC1Q6ZN28 852 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 TREML1Q86YW5 311 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 ESAMQ96AP7 390 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 GPR88Q9GZN0 384 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 CD320Q9NPF0 282 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 TREHO43280 583 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 NBNO60934 754 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 CYP3A5P20815 502 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SYPL2Q5VXT5 272 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 CHMP1BQ7LBR1 199 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SIAH1Q8IUQ4 282 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 IGDCC3Q8IVU1 814 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 RTL3Q8N8U3 475 aaKnown RBP11.47□□□□□ -0.57
PTCH1-203ENST00000375274 OR6K2Q8NGY2 324 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 SPPL2BQ8TCT7 592 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 RAB2BQ8WUD1 216 aa11.47□□□□□ -0.57
PTCH1-203ENST00000375274 LOC110117498-PIK3R3F6TDL0 507 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 QSOX1O00391 747 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 TFECO14948 347 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-203ENST00000375274 TOP3BO95985 862 aaKnown RBP11.46□□□□□ -0.57
PTCH1-203ENST00000375274 GOT2P00505 430 aaKnown RBP11.46□□□□□ -0.57
PTCH1-203ENST00000375274 ZNF12P17014 697 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 SCNN1AP37088 669 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 HSPA7P48741 367 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 ABRQ12979 859 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 SLC9A4Q6AI14 798 aa11.46□□□□□ -0.57
PTCH1-203ENST00000375274 UBE2R2Q712K3 238 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-203ENST00000375274 CCDC80Q76M96 950 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms