RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 EPHA3P29320 983 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 AQP1P29972 269 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 ERVK-21P61565 698 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 NOMO3P69849 1222 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 SEMA5AQ13591 1074 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 PTPN20Q4JDL3 420 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 BHLHB9Q6PI77 547 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 ZNF615Q8N8J6 731 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 ART5Q96L15 291 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 TLR10Q9BXR5 811 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 MAFFQ9ULX9 164 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 NCK1P16333 377 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 TLE2Q04725 743 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 ZACNQ401N2 412 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 SFRP1Q8N474 314 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 LRRC52Q8N7C0 313 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 AENQ8WTP8 325 aaKnown RBP14.25□□□□□ -0.13
TRAF1-201ENST00000373887 RNF31Q96EP0 1072 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 SERPINA3P01011 423 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 MBTD1Q05BQ5 628 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 LRRC55Q6ZSA7 311 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 OTOP3Q7RTS5 596 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 CERS2Q96G23 380 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 ITCHQ96J02 903 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 CEP295NLQ96MC4 621 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 WRBO00258 174 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 GNRH1P01148 92 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 NRSN1Q8IZ57 195 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 CHST4Q8NCG5 386 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 SPPL2BQ8TCT7 592 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 LRMDAQ9H2I8 198 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 PRDM8Q9NQV8 689 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 GRIP1Q9Y3R0 1128 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 RGSL1A5PLK6 1076 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 C9IYK1 514 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 TIPRLO75663 272 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 SLC6A2P23975 617 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 FAUP35544 74 aaKnown RBP14.25□□□□□ -0.13
TRAF1-201ENST00000373887 NR1H2P55055 460 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 GJA9P57773 515 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 BAP1Q92560 729 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 C11orf24Q96F05 449 aaPredicted RBP14.25□□□□□ -0.13
TRAF1-201ENST00000373887 RPL10LQ96L21 214 aaKnown RBP14.25□□□□□ -0.13
TRAF1-201ENST00000373887 GPN1Q9HCN4 374 aaPredicted RBP14.25□□□□□ -0.13
TRAF1-201ENST00000373887 DHRS12A0PJE2 317 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 CHADO15335 359 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 LIASO43766 372 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 OR7A10O76100 309 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 SEPHS1P49903 392 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 RTP1P59025 263 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 SEMG2Q02383 582 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 INTS6LQ5JSJ4 861 aaKnown RBP14.24□□□□□ -0.13
TRAF1-201ENST00000373887 RAVER1Q8IY67 606 aaKnown RBP14.24□□□□□ -0.13
TRAF1-201ENST00000373887 HDAC10Q969S8 669 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 ZNF607Q96SK3 696 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 MGAT4AQ9UM21 535 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 SUV39H1O43463 412 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 UGT2B17O75795 530 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 FTH1P02794 183 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 TTKP33981 857 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 FAM91A1Q658Y4 838 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 ERICH5Q6P6B1 374 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 MSANTD1Q6ZTZ1 278 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 SH3RF1Q7Z6J0 888 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 C10orf107Q8IVU9 208 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 MECRQ9BV79 373 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 CHMP1AQ9HD42 196 aaPredicted RBP14.24□□□□□ -0.13
TRAF1-201ENST00000373887 PNPLA3Q9NST1 481 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 CNOT6Q9ULM6 557 aaKnown RBP14.24□□□□□ -0.13
TRAF1-201ENST00000373887 FCF1Q9Y324 198 aaKnown RBP14.24□□□□□ -0.13
TRAF1-201ENST00000373887 PLIN3O60664 434 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 RPL22P35268 128 aaKnown RBP14.24□□□□□ -0.13
TRAF1-201ENST00000373887 NRG3P56975 720 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 GPM6BQ13491 265 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 VARS2Q5ST30 1063 aaKnown RBP14.24□□□□□ -0.13
TRAF1-201ENST00000373887 PRR23BQ6ZRT6 265 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 CKAP2Q8WWK9 683 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 LINGO1Q96FE5 620 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 TBC1D10AQ9BXI6 508 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 ZNF510Q9Y2H8 683 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 AP4B1Q9Y6B7 739 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 PER2O15055 1255 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 ALAS2P22557 587 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 RAB10P61026 200 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 BTN3A2P78410 334 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 RHBDF2Q6PJF5 856 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 GPR180Q86V85 440 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 MFSD14AQ96MC6 490 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 ACTL7BQ9Y614 415 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 URADA6NGE7 173 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 SERPINB7O75635 380 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 IFNGP01579 166 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 CDK9P50750 372 aaKnown RBP14.24□□□□□ -0.13
TRAF1-201ENST00000373887 CCDC36Q8IYA8 594 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 OR5T3Q8NGG3 340 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 TCF12Q99081 682 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 FUCA2Q9BTY2 467 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 TMCO1Q9UM00 188 aa14.24□□□□□ -0.13
TRAF1-201ENST00000373887 METTL18O95568 372 aa14.23□□□□□ -0.13
TRAF1-201ENST00000373887 C8AP07357 584 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms