RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RSPH9Q9H1X1 276 aaPredicted RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 LYVE1Q9Y5Y7 322 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 BPTFQ12830 3046 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 A0A0D9SEW6 157 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SRRM3A6NNA2 597 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 RFXANKO14593 260 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 CDK14O94921 469 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ALOX12P18054 663 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 IGFBP4P22692 258 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 GPR1P46091 355 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 GALK1P51570 392 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 NEK2P51955 445 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SQLEQ14534 574 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 KCNJ11Q14654 390 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SIX1Q15475 284 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 PPP1R3AQ16821 1122 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 BRMS1LQ5PSV4 323 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 GLYATQ6IB77 296 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 USP45Q70EL2 814 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SATL1Q86VE3 508 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 OR10A6Q8NH74 314 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 REXO5Q96IC2 774 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 STRA6Q9BX79 667 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 NFKBIZQ9BYH8 718 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ATP13A3Q9H7F0 1226 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 LIN28AQ9H9Z2 209 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 RAB23Q9ULC3 237 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ZNF490Q9ULM2 529 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TSC22D4Q9Y3Q8 395 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 CDC7O00311 574 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TOR1BO14657 336 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TSC22D2O75157 780 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SORBS2O94875 1100 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SNUPNO95149 360 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 FTH1P02794 183 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 CATP04040 527 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 FGF1P05230 155 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 IVDP26440 423 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 CCND3P30281 292 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 NUP107P57740 925 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 CSTF3Q12996 717 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SDE2Q6IQ49 451 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ZFP1Q6P2D0 407 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 AFTPHQ6ULP2 937 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 UBE2R2Q712K3 238 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 GPR180Q86V85 440 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 PARGQ86W56 976 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 OSCP1Q8WVF1 389 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 PANX3Q96QZ0 392 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ACBD6Q9BR61 282 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 MTIF3Q9H2K0 278 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ASAH2Q9NR71 780 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ADGRE2Q9UHX3 823 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 GABRQQ9UN88 632 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ITM2BQ9Y287 266 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ARID1AO14497 2285 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 A0A1W2PRU2 124 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 MYADML2A6NDP7 307 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 IRAK2O43187 625 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 NOBOXO60393 691 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TPST2O60704 377 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TOMM70O94826 608 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 KCNH1O95259 989 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 NDST3O95803 873 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 KRT8P05787 483 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 MAT2AP31153 395 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SNRPD1P62314 119 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 PRKD1Q15139 912 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 DRICH1Q6PGQ1 229 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 CHST15Q7LFX5 561 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 FBXO27Q8NI29 283 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SUSD6Q92537 303 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TP53INP1Q96A56 240 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 RNF31Q96EP0 1072 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 C16orf70Q9BSU1 422 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 AARSD1Q9BTE6 412 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 C9orf16Q9BUW7 83 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 REXO4Q9GZR2 422 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 NOL6Q9H6R4 1146 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 EQTNQ9NQ60 294 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 DAPK2Q9UIK4 370 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 LEF1Q9UJU2 399 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SAMHD1Q9Y3Z3 626 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 APC2O95996 2303 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 MAP3K13O43283 966 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 DIRAS1O95057 198 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 EPN2O95208 641 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 PIGRP01833 764 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 GBAP04062 536 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 PRSS56P0CW18 603 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 CCR4P51679 360 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 EPS8Q12929 822 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SGCGQ13326 291 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TMPRSS11BQ86T26 416 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 GATAD2AQ86YP4 633 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 BBS7Q8IWZ6 715 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TTC9BQ8N6N2 239 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms