RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 KAT8Q9H7Z6 458 aaKnown RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 AASDHPPTQ9NRN7 309 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 IGSF9Q9P2J2 1179 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 RAB23Q9ULC3 237 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 UBXN8O00124 270 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 AMHP03971 560 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 AOC1P19801 751 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 TPTEP56180 551 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 CPTPQ5TA50 214 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 TPGS1Q6ZTW0 290 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 DENND6AQ8IWF6 608 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 ENDOVQ8N8Q3 282 aaKnown RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 CNOT6Q9ULM6 557 aaKnown RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 AQP12BA6NM10 295 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 MSI1O43347 362 aaKnown RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 PTPN5P54829 565 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 GPX6P59796 221 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 AQP12AQ8IXF9 295 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 OR4A15Q8NGL6 344 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 ZFAND2BQ8WV99 257 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 ZNF607Q96SK3 696 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 FEM1AQ9BSK4 669 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 FAIM2Q9BWQ8 316 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 STARD7Q9NQZ5 370 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 SUCOQ9UBS9 1254 aaKnown RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 MFHAS1Q9Y4C4 1052 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 PEX16Q9Y5Y5 336 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 HSDL1Q3SXM5 330 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 SDHAF4Q5VUM1 108 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 DOK6Q6PKX4 331 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 SMYD1Q8NB12 490 aa17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 NTPCRQ9BSD7 190 aaKnown RBP17.04■□□□□ 0.32
PTP4A1-201ENST00000370651 CXorf49A8MYA2 514 aaPredicted RBP17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 TOR1BO14657 336 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 TRBC1P01850 177 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 PAX3P23760 479 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 ZBED5Q49AG3 693 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 FBXO48Q5FWF7 155 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 LPPQ93052 612 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 IPPKQ9H8X2 491 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 TMEM138Q9NPI0 162 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 QSOX1O00391 747 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 PGRMC2O15173 223 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 BMP7P18075 431 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 GPAT3Q53EU6 434 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 DAW1Q8N136 415 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 PPCDCQ96CD2 204 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 TINF2Q9BSI4 451 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 MRPL9Q9BYD2 267 aaKnown RBP17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 H3BSA7 217 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 MT-CYBP00156 380 aaPredicted RBP17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 ALDH4A1P30038 563 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 MTAPQ13126 283 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 EIF2B5Q13144 721 aaKnown RBP17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 KIFC1Q9BW19 673 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 ZNF395Q9H8N7 513 aaPredicted RBP17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 GOLGA2P5Q9HBQ8 144 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 SMIM28A0A1B0GU29 152 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 ABRQ12979 859 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 CA9Q16790 459 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 FRMD7Q6ZUT3 714 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 ZZZ3Q8IYH5 903 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 CMASQ8NFW8 434 aaPredicted RBP17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 GRIN3AQ8TCU5 1115 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 STYXQ8WUJ0 223 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 DIRAS2Q96HU8 199 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 SLC25A51Q9H1U9 297 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 OXSMQ9NWU1 459 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 PCDHB1Q9Y5F3 818 aa17.03■□□□□ 0.32
PTP4A1-201ENST00000370651 PLIN4Q96Q06 1357 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 IGKV6D-41A0A0C4DH26 115 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 SCAMP3O14828 347 aaKnown RBP17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 VNN1O95497 513 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 NDST3O95803 873 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 L1CAMP32004 1257 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 SLC9A4Q6AI14 798 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 PDSS2Q86YH6 399 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 MPP5Q8N3R9 675 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 OR10A6Q8NH74 314 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 SP140LQ9H930 580 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 GPR25O00155 361 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 NRLP54845 237 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 SLC18A2Q05940 514 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 SCN1BQ07699 218 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 PPM1LQ5SGD2 360 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 TSTD2Q5T7W7 516 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 UBE2R2Q712K3 238 aaPredicted RBP17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 GLIS1Q8NBF1 620 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 PHF12Q96QT6 1004 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 OR52B2Q96RD2 323 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 GPR20Q99678 358 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 BRD9Q9H8M2 597 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 XPNPEP1Q9NQW7 623 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 COL20A1Q9P218 1284 aa17.02■□□□□ 0.32
PTP4A1-201ENST00000370651 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.02■□□□□ 0.31
PTP4A1-201ENST00000370651 TNFRSF11BO00300 401 aa17.02■□□□□ 0.31
PTP4A1-201ENST00000370651 CCL22O00626 93 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms