RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 ATP13A5Q4VNC0 1218 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 LYPLAL1Q5VWZ2 237 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 MMAAQ8IVH4 418 aaKnown RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 CHPFQ8IZ52 775 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ZNF513Q8N8E2 541 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 SREK1Q8WXA9 508 aaKnown RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 KCNJ9Q92806 393 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 SLC30A3Q99726 388 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 C20orf27Q9GZN8 174 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 PRSS16Q9NQE7 514 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 OXSMQ9NWU1 459 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 TRMT6Q9UJA5 497 aaKnown RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 PCDHB1Q9Y5F3 818 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 COMMD10Q9Y6G5 202 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 OAS3Q9Y6K5 1087 aaKnown RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 STON1Q9Y6Q2 735 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 AGAP14A8MT82 685 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 IQCF5A8MTL0 148 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 E5RI56 91 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 SPINT1O43278 529 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ZBTB14O43829 449 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 PYGLP06737 847 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ELFN1P0C7U0 828 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 CD1DP15813 335 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ETV3P41162 512 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ACAP2Q15057 778 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 TXNDC11Q6PKC3 985 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 PAQR3Q6TCH7 311 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 DSG4Q86SJ6 1040 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 SIDT2Q8NBJ9 832 aaKnown RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 GIMAP7Q8NHV1 300 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 EZH1Q92800 747 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 PPP1R16AQ96I34 528 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 LRCH3Q96II8 777 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 SPATA16Q9BXB7 569 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ABCG8Q9H221 673 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ALG9Q9H6U8 611 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 KLHL14Q9P2G3 628 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 SUN2Q9UH99 717 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ARL2BPQ9Y2Y0 163 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 C1QTNF3-AMACRE9PGA6 284 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 SPECC1L-ADORA2AF8WAN1 911 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 ITM2AO43736 263 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 TRIM13O60858 407 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 HNRNPLP14866 589 aaKnown RBP eCLIP16.66■□□□□ 0.26
PHGDH-202ENST00000369409 CHRM3P20309 590 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 RPS3P23396 243 aaKnown RBP eCLIP16.66■□□□□ 0.263e-8■■■■■ 28.4
PHGDH-202ENST00000369409 GRK2P25098 689 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 CTHP32929 405 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 SLC1A6P48664 564 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 CCDC85BQ15834 202 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-202ENST00000369409 LIPMQ5VYY2 423 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 PTRHD1Q6GMV3 140 aaKnown RBP16.66■□□□□ 0.26
PHGDH-202ENST00000369409 FBXL19Q6PCT2 694 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 NAPRTQ6XQN6 538 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 LIPIQ6XZB0 460 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 Q6ZVL8 140 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 CACUL1Q86Y37 369 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 CD200R1Q8TD46 325 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 SCAMP4Q969E2 229 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 PTERQ96BW5 349 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 WRAP53Q9BUR4 548 aaKnown RBP16.66■□□□□ 0.26
PHGDH-202ENST00000369409 TRIM55Q9BYV6 548 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 UBE2ZQ9H832 354 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-202ENST00000369409 SYTL2Q9HCH5 934 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 SARS2Q9NP81 518 aaKnown RBP16.66■□□□□ 0.26
PHGDH-202ENST00000369409 DYRK4Q9NR20 520 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 THAP1Q9NVV9 213 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 GNPTGQ9UJJ9 305 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 PRSS21Q9Y6M0 314 aa16.66■□□□□ 0.26
PHGDH-202ENST00000369409 K7EQS6 105 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 MBTPS2O43462 519 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 DLX3O60479 287 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 RBP1P09455 135 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 ADRB3P13945 408 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 ARRB2P32121 409 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 TIE1P35590 1138 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 DCDC1P59894 354 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 PFKPQ01813 784 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 IFT88Q13099 833 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 SMAD4Q13485 552 aaKnown RBP16.65■□□□□ 0.26
PHGDH-202ENST00000369409 C6orf89Q6UWU4 347 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 SUGP1Q8IWZ8 645 aaKnown RBP16.65■□□□□ 0.26
PHGDH-202ENST00000369409 CLDN19Q8N6F1 224 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 TXNDC5Q8NBS9 432 aaKnown RBP16.65■□□□□ 0.26
PHGDH-202ENST00000369409 RFWD2Q8NHY2 731 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 C10orf82Q8WW14 230 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 FAM83DQ9H4H8 585 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 DCTN4Q9UJW0 460 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 NEMP2A6NFY4 417 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 H3BMM5 538 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 CD9P21926 228 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 KIR2DL1P43626 348 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-202ENST00000369409 HNRNPH2P55795 449 aaKnown RBP16.65■□□□□ 0.26
PHGDH-202ENST00000369409 ENPP2Q13822 863 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 ACOX1Q15067 660 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 SKIV2LQ15477 1246 aaKnown RBP16.65■□□□□ 0.26
PHGDH-202ENST00000369409 ISCA2Q86U28 154 aa16.65■□□□□ 0.26
PHGDH-202ENST00000369409 SPATS2Q86XZ4 545 aaKnown RBP16.65■□□□□ 0.26
PHGDH-202ENST00000369409 CRLF3Q8IUI8 442 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms