RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 PCDHGA7Q9Y5G6 932 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 SUPT3HB4E1H0 165 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 ACOT8O14734 319 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 FZD6O60353 706 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 SUPT3HO75486 399 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 MLYCDO95822 493 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 CDH13P55290 713 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 IL2P60568 153 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 RHOAP61586 193 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 AP1S1P61966 158 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 TWF1Q12792 350 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 TRAF2Q12933 501 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 TRIM25Q14258 630 aaKnown RBP13.07□□□□□ -0.32
ECM1-202ENST00000369047 TRIP10Q15642 601 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 PPP1R3AQ16821 1122 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 OGFRL1Q5TC84 451 aaPredicted RBP13.07□□□□□ -0.32
ECM1-202ENST00000369047 CERS6Q6ZMG9 384 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 DDX53Q86TM3 631 aaKnown RBP13.07□□□□□ -0.32
ECM1-202ENST00000369047 PCYOX1LQ8NBM8 494 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 HMGCLL1Q8TB92 370 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 EXT2Q93063 718 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 LRCH3Q96II8 777 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 ZFRQ96KR1 1074 aaKnown RBP13.07□□□□□ -0.32
ECM1-202ENST00000369047 CCT7Q99832 543 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 AKTIPQ9H8T0 292 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 LMCD1Q9NZU5 365 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 CCDC167Q9P0B6 97 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 DNMT3BQ9UBC3 853 aaKnown RBP13.07□□□□□ -0.32
ECM1-202ENST00000369047 FKBPLQ9UIM3 349 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 ASB3Q9Y575 518 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 OR51B4Q9Y5P0 310 aa13.07□□□□□ -0.32
ECM1-202ENST00000369047 GFRA2O00451 464 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 OLFM2O95897 454 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 URODP06132 367 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 UQCRBP14927 111 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 HMGCLP35914 325 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 DPP6P42658 865 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 CSNK1DP48730 415 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 PKNOX1P55347 436 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 MS4A2Q01362 244 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 CACNG1Q06432 222 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 GRIK2Q13002 908 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 GPM6BQ13491 265 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 GEN1Q17RS7 908 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 REP15Q6BDI9 236 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 PDE12Q6L8Q7 609 aaKnown RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 FAM217AQ8IXS0 508 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 DCAF4L2Q8NA75 395 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 PIP4K2CQ8TBX8 421 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 UCMAQ8WVF2 138 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 TWIST2Q8WVJ9 160 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 WBP2Q969T9 261 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.06□□□□□ -0.32
ECM1-202ENST00000369047 FUBP1Q96AE4 644 aaKnown RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 PDLIM5Q96HC4 596 aaKnown RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 LRGUKQ96M69 825 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 GAS2L1Q99501 681 aaPredicted RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 C17orf80Q9BSJ5 609 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 NUSAP1Q9BXS6 441 aaKnown RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 SPAG4Q9NPE6 437 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 ADA2Q9NZK5 511 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 PDP2Q9P2J9 529 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 ZNF510Q9Y2H8 683 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 MTF2Q9Y483 593 aaPredicted RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 PCDHB1Q9Y5F3 818 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 DPPA5A6NC42 116 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 FBP2O00757 339 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 SNAP91O60641 907 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 ECI2O75521 394 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 SIX3O95343 332 aaPredicted RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 RPS17P08708 135 aaKnown RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 PRSS56P0CW18 603 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 LBPP18428 481 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 GPX3P22352 226 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 MZF1P28698 734 aaPredicted RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 EEF1DP29692 281 aaKnown RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 MAPK8P45983 427 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 MRPL19P49406 292 aaKnown RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 MED21Q13503 144 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 ZRANB3Q5FWF4 1079 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 RARS2Q5T160 578 aaKnown RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 LPCAT4Q643R3 524 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 PSAPL1Q6NUJ1 521 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 RETSATQ6NUM9 610 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 Q6ZNB5 142 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 TMEM150AQ86TG1 271 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 ICA1LQ8NDH6 482 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 BHLHE22Q8NFJ8 381 aaPredicted RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 TRPC4APQ8TEL6 797 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 TSPEARQ8WU66 669 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 ACDQ96AP0 544 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 ALG14Q96F25 216 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 C2orf49Q9BVC5 232 aaPredicted RBP13.06□□□□□ -0.32
ECM1-202ENST00000369047 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.06□□□□□ -0.326e-6■■□□□ 13.7
ECM1-202ENST00000369047 IL17CQ9P0M4 197 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 CROTQ9UKG9 612 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 NDUFAF1Q9Y375 327 aa13.06□□□□□ -0.32
ECM1-202ENST00000369047 INSL5Q9Y5Q6 135 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms