RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 TMEM121Q9BTD3 319 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 OR2AG1Q9H205 316 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.68■■□□□ 1.38
PFDN2-201ENST00000368010 PPP2R2CQ9Y2T4 447 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 ASXL3Q9C0F0 2248 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 NTN3O00634 580 aaPredicted RBP23.67■■□□□ 1.38
PFDN2-201ENST00000368010 GRID2O43424 1007 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 USP12O75317 370 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 ECEL1O95672 775 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 ZNF8P17098 575 aaPredicted RBP23.67■■□□□ 1.38
PFDN2-201ENST00000368010 GDF10P55107 478 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 OLIG2Q13516 323 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 P3H1Q32P28 736 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 ATP13A5Q4VNC0 1218 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 ZNF648Q5T619 568 aaPredicted RBP23.67■■□□□ 1.38
PFDN2-201ENST00000368010 KLHDC8BQ8IXV7 354 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 NAGSQ8N159 534 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 ARL14Q8N4G2 192 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 DTX3LQ8TDB6 740 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 GFM1Q96RP9 751 aaKnown RBP23.67■■□□□ 1.38
PFDN2-201ENST00000368010 TBL1YQ9BQ87 522 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 LRRN3Q9H3W5 708 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 IL26Q9NPH9 171 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 ASPMQ8IZT6 3477 aa23.67■■□□□ 1.38
PFDN2-201ENST00000368010 GLYATL1P3A0A0U1RQE8 302 aa23.66■■□□□ 1.38
PFDN2-201ENST00000368010 C2orf81A6NN90 581 aa23.66■■□□□ 1.38
PFDN2-201ENST00000368010 CASC3O15234 703 aaKnown RBP23.66■■□□□ 1.38
PFDN2-201ENST00000368010 STX7O15400 261 aaKnown RBP23.66■■□□□ 1.38
PFDN2-201ENST00000368010 BUD23O43709 281 aaKnown RBP23.66■■□□□ 1.38
PFDN2-201ENST00000368010 ACP5P13686 325 aa23.66■■□□□ 1.38
PFDN2-201ENST00000368010 CCL7P80098 99 aa23.66■■□□□ 1.38
PFDN2-201ENST00000368010 TAF1AQ15573 450 aaPredicted RBP23.66■■□□□ 1.38
PFDN2-201ENST00000368010 ADGRG6Q86SQ4 1221 aa23.66■■□□□ 1.38
PFDN2-201ENST00000368010 Q8N9G6 341 aaPredicted RBP23.66■■□□□ 1.38
PFDN2-201ENST00000368010 PATE1Q8WXA2 126 aa23.66■■□□□ 1.38
PFDN2-201ENST00000368010 FEZ2Q9UHY8 353 aaPredicted RBP23.66■■□□□ 1.38
PFDN2-201ENST00000368010 MYLKQ15746 1914 aa23.66■■□□□ 1.38
PFDN2-201ENST00000368010 SCN8AQ9UQD0 1980 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 A0A1W2PQM1 296 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 RHPN2P1A8MT19 583 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 LIASO43766 372 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 VEGFDO43915 354 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 METTL18O95568 372 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 LPOP22079 712 aaPredicted RBP23.65■■□□□ 1.38
PFDN2-201ENST00000368010 STIP1P31948 543 aaKnown RBP23.65■■□□□ 1.38
PFDN2-201ENST00000368010 FAM151BQ6UXP7 276 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 SPRED1Q7Z699 444 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 GDAP1Q8TB36 358 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 KCNK6Q9Y257 313 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 ENTPD2Q9Y5L3 495 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 ARL5AQ9Y689 179 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 RP1P56715 2156 aa23.65■■□□□ 1.38
PFDN2-201ENST00000368010 D6RAR5 112 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 ZW10O43264 779 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 MTX2O75431 263 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 CRTAMO95727 393 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 ITGA9Q13797 1035 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 SPARCL1Q14515 664 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 OASLQ15646 514 aaKnown RBP23.64■■□□□ 1.37
PFDN2-201ENST00000368010 CHRNA6Q15825 494 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 CRTC3Q6UUV7 619 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 ZNF438Q7Z4V0 828 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 BRSK1Q8TDC3 778 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 C1orf54Q8WWF1 131 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 RTP4Q96DX8 246 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 ATXN7L3BQ96GX2 97 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 LRRC40Q9H9A6 602 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 ARNT2Q9HBZ2 717 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 TMPRSS11EQ9UL52 423 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 RAXQ9Y2V3 346 aa23.64■■□□□ 1.37
PFDN2-201ENST00000368010 CHUKO15111 745 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 BRINP1O60477 761 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 CDK14O94921 469 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 MPOP05164 745 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 PDX1P52945 283 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 GABREP78334 506 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 PDE1BQ01064 536 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 GTF2H3Q13889 308 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 KCTD11Q693B1 232 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 DENND5AQ6IQ26 1287 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 LRRTM4Q86VH4 590 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 COL27A1Q8IZC6 1860 aaPredicted RBP23.63■■□□□ 1.37
PFDN2-201ENST00000368010 LSMEM2Q8N112 164 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 TLR10Q9BXR5 811 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 POLR1BQ9H9Y6 1135 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 ZNF148Q9UQR1 794 aa23.63■■□□□ 1.37
PFDN2-201ENST00000368010 CACNA1BQ00975 2339 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 KMT2BQ9UMN6 2715 aaPredicted RBP23.62■■□□□ 1.37
PFDN2-201ENST00000368010 PSMD3O43242 534 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 LSSP48449 732 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 B4GALNT1Q00973 533 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 PTPRCAPQ14761 206 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 NR1D2Q14995 579 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 INSCQ1MX18 579 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 KHDC1Q4VXA5 237 aaKnown RBP23.62■■□□□ 1.37
PFDN2-201ENST00000368010 C3orf38Q5JPI3 329 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 LDLRAP1Q5SW96 308 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 SFRP1Q8N474 314 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 OR4K2Q8NGD2 314 aa23.62■■□□□ 1.37
PFDN2-201ENST00000368010 SLC37A2Q8TED4 501 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms